Difference between revisions of "NUCLEOTIDASE-RXN"

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(Created page with "Category:reaction == Reaction ECOAH6h == * direction: ** reversible * common-name: ** enoyl-coa hydratase (c14:0) == Reaction formula == * 1.0 CPD0-2171[h] '''<=>''' 1...")
(Created page with "Category:reaction == Reaction ASPARAGINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** asparagine-trna ligase * ec-number: ** [http://enzyme.expasy.o...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ECOAH6h ==
+
== Reaction ASPARAGINE--TRNA-LIGASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** enoyl-coa hydratase (c14:0)
+
** asparagine-trna ligase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.22 ec-6.1.1.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[CPD0-2171]][h] '''<=>''' 1.0 [[CPD-15568]][h] '''+''' 1.0 [[WATER]][h]
+
* 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03584]]
+
* Gene: [[SJ20233]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18954]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging:
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=enoyl-coa hydratase (c14:0)}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11181 11181]
−
{{#set: nb gene associated=1}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
−
{{#set: reconstruction category=orthology}}
+
* UNIPROT:
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P39772 P39772]
 +
** [http://www.uniprot.org/uniprot/O57980 O57980]
 +
** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
 +
** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
 +
** [http://www.uniprot.org/uniprot/P47359 P47359]
 +
** [http://www.uniprot.org/uniprot/O51128 O51128]
 +
** [http://www.uniprot.org/uniprot/O83618 O83618]
 +
** [http://www.uniprot.org/uniprot/O58008 O58008]
 +
** [http://www.uniprot.org/uniprot/O96198 O96198]
 +
** [http://www.uniprot.org/uniprot/P54262 P54262]
 +
** [http://www.uniprot.org/uniprot/P75521 P75521]
 +
** [http://www.uniprot.org/uniprot/Q48966 Q48966]
 +
** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=asparagine-trna ligase}}
 +
{{#set: ec-number=ec-6.1.1.22}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:05, 14 January 2021

Reaction ASPARAGINE--TRNA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • asparagine-trna ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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