Difference between revisions of "O-SUCCHOMOSERLYASE-RXN"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...") |
(Created page with "Category:reaction == Reaction O-SUCCHOMOSERLYASE-RXN == * direction: ** reversible * common-name: ** cystathionine gamma-synthase * ec-number: ** [http://enzyme.expasy.org...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction O-SUCCHOMOSERLYASE-RXN == |
− | * | + | * direction: |
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** cystathionine gamma-synthase |
− | == Reaction(s) | + | * ec-number: |
− | * [[ | + | ** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48] |
− | * [[ | + | == Reaction formula == |
− | * [[ | + | * 1 [[CYS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c] |
− | * [[ | + | == Gene(s) associated with this reaction == |
− | == | + | * Gene: [[SJ05358]] |
− | * [http:// | + | ** Category: [[annotation]] |
− | * [http:// | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | {{#set: | + | * Gene: [[SJ05357]] |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: nb | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | {{#set: | + | * Gene: [[SJ20026]] |
− | {{#set: | + | ** Category: [[annotation]] |
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | == Pathway(s) == | ||
+ | * [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-801]], homocysteine and cysteine interconversion: | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | == External links == | ||
+ | * METANETX-RXN : MNXR104380 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6] | ||
+ | ** [http://www.uniprot.org/uniprot/P38675 P38675] | ||
+ | ** [http://www.uniprot.org/uniprot/P24601 P24601] | ||
+ | ** [http://www.uniprot.org/uniprot/P00935 P00935] | ||
+ | ** [http://www.uniprot.org/uniprot/O04981 O04981] | ||
+ | ** [http://www.uniprot.org/uniprot/O04982 O04982] | ||
+ | ** [http://www.uniprot.org/uniprot/O81334 O81334] | ||
+ | ** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=cystathionine gamma-synthase}} | ||
+ | {{#set: ec-number=ec-2.5.1.48}} | ||
+ | {{#set: nb gene associated=3}} | ||
+ | {{#set: nb pathway associated=3}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:24, 18 March 2021
Contents
Reaction O-SUCCHOMOSERLYASE-RXN
- direction:
- reversible
- common-name:
- cystathionine gamma-synthase
- ec-number:
Reaction formula
- 1 CYS[c] + 1 O-SUCCINYL-L-HOMOSERINE[c] <=> 1 L-CYSTATHIONINE[c] + 1 PROTON[c] + 1 SUC[c]
Gene(s) associated with this reaction
- Gene: SJ05358
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ05357
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ20026
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-I9, L-cysteine biosynthesis VI (from L-methionine):
- 4 reactions found over 5 reactions in the full pathway
- PWY-801, homocysteine and cysteine interconversion:
- 3 reactions found over 4 reactions in the full pathway
- HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR104380
- RHEA:
- LIGAND-RXN:
- UNIPROT: