Difference between revisions of "ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10462 RXN-10462] == * direction: ** left-to-right * common-name: ** acyl-acp:sn-glycerol-3-phos...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.224-RXN 2.4.1.224-RXN] == * direction: ** left-to-right * common-name: ** n-acetylglucosaminy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10462 RXN-10462] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.224-RXN 2.4.1.224-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** acyl-acp:sn-glycerol-3-phosphate 1-o-acyltransferase
+
** n-acetylglucosaminyl-proteoglycan 4-β-glucuronosyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.15 ec-2.3.1.15]
+
** [http://enzyme.expasy.org/EC/2.4.1.224 ec-2.4.1.224]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACYL-ACP]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[ACYL-SN-GLYCEROL-3P]][c]
+
* 1 [[GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[GlcNAc-GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Core]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11668]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ14184]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ01052]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18504]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08295]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07780]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08296]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14192]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11522]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08300]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319]
+
* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42301 42301]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16214 16214]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09380 R09380]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07334 R07334]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P0A7A7 P0A7A7]
 
−
** [http://www.uniprot.org/uniprot/Q43822 Q43822]
 
−
** [http://www.uniprot.org/uniprot/Q39639 Q39639]
 
−
** [http://www.uniprot.org/uniprot/Q39317 Q39317]
 
−
** [http://www.uniprot.org/uniprot/Q8LG50 Q8LG50]
 
−
** [http://www.uniprot.org/uniprot/Q43869 Q43869]
 
−
** [http://www.uniprot.org/uniprot/Q43307 Q43307]
 
−
** [http://www.uniprot.org/uniprot/P30706 P30706]
 
−
** [http://www.uniprot.org/uniprot/P10349 P10349]
 
−
** [http://www.uniprot.org/uniprot/P44857 P44857]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=acyl-acp:sn-glycerol-3-phosphate 1-o-acyltransferase}}
+
{{#set: common-name=n-acetylglucosaminyl-proteoglycan 4-&beta;-glucuronosyltransferase}}
−
{{#set: ec-number=ec-2.3.1.15}}
+
{{#set: ec-number=ec-2.4.1.224}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=8}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction 2.4.1.224-RXN

  • direction:
    • left-to-right
  • common-name:
    • n-acetylglucosaminyl-proteoglycan 4-β-glucuronosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6558, heparan sulfate biosynthesis (late stages): PWY-6558
    • 7 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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