Difference between revisions of "OROTPDECARB-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-8026 == * direction: ** left-to-right * synonymous: ** crtz == Reaction formula == * 1 CPD-7409[c] '''+''' 1 OXYGEN-MOLECULE[c] '...")
(Created page with "Category:reaction == Reaction DGTPtm == * direction: ** reversible * common-name: ** deoxynucleotide carrier (dgtp), mitochondrial == Reaction formula == * 1.0 DGDP[c]...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8026 ==
+
== Reaction DGTPtm ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* synonymous:
+
* common-name:
−
** crtz
+
** deoxynucleotide carrier (dgtp), mitochondrial
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-7409]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
+
* 1.0 [[DGDP]][c] '''+''' 1.0 [[DGTP]][m] '''<=>''' 1.0 [[DGDP]][m] '''+''' 1.0 [[DGTP]][c] '''+''' 1.0 [[PROTON]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07227]]
+
* Gene: [[SJ21349]]
−
** Category: [[manual]]
+
** Category: [[orthology]]
−
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ07228]]
 
−
** Category: [[manual]]
 
−
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5944]], zeaxanthin biosynthesis:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae):
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07559 R07559]
+
{{#set: common-name=deoxynucleotide carrier (dgtp), mitochondrial}}
−
* RHEA:
+
{{#set: nb gene associated=1}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30330 30330]
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: synonymous=crtz}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: nb gene associated=2}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction tool=curation}}
 
−
{{#set: reconstruction comment=transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)}}
 
−
{{#set: reconstruction source=sjap}}
 

Revision as of 11:25, 15 January 2021

Reaction DGTPtm

  • direction:
    • reversible
  • common-name:
    • deoxynucleotide carrier (dgtp), mitochondrial

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=OROTPDECARB-RXN&oldid=115940"