Difference between revisions of "OROTPDECARB-RXN"

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(Created page with "Category:reaction == Reaction RXN-8026 == * direction: ** left-to-right * synonymous: ** crtz == Reaction formula == * 1 CPD-7409[c] '''+''' 1 OXYGEN-MOLECULE[c] '...")
(Created page with "Category:reaction == Reaction METBALT-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1 ec-4.3.1] == Reaction formula == * 1 O-SUCC...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-8026 ==
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== Reaction METBALT-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* synonymous:
+
* ec-number:
** crtz
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** [http://enzyme.expasy.org/EC/4.3.1 ec-4.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-7409]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
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* 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07227]]
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* Gene: [[SJ20026]]
** Category: [[manual]]
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** Category: [[orthology]]
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ07228]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
** Category: [[manual]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis):
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5944]], zeaxanthin biosynthesis:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae):
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R07559 R07559]
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** [http://www.genome.jp/dbget-bin/www_bget?R00999 R00999]
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30330 30330]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: synonymous=crtz}}
+
{{#set: ec-number=ec-4.3.1}}
{{#set: nb gene associated=2}}
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{{#set: nb gene associated=1}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction comment=transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)}}
+
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=sjap}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:35, 5 January 2021

Reaction METBALT-RXN

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links