Difference between revisions of "OXALATE-DECARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction TAGAALDOL-RXN == * direction: ** left-to-right * common-name: ** tagatose-1,6-bisphosphate aldolase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction OXALATE-DECARBOXYLASE-RXN == * direction: ** left-to-right * common-name: ** oxalate decarboxylase * ec-number: ** [http://enzyme.expasy.org/...")
 
(6 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TAGAALDOL-RXN ==
+
== Reaction OXALATE-DECARBOXYLASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** tagatose-1,6-bisphosphate aldolase
+
** oxalate decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.40 ec-4.1.2.40]
+
** [http://enzyme.expasy.org/EC/4.1.1.2 ec-4.1.1.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[TAGATOSE-1-6-DIPHOSPHATE]][c] '''=>''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[GAP]][c]
+
* 1 [[OXALATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[FORMATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17481]]
+
* Gene: [[SJ12638]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08942]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GALACTITOLCAT-PWY]], galactitol degradation:
+
* [[PWY-6698]], oxalate degradation V:
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7395]], D-galactosamine and N-acetyl-D-galactosamine degradation:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7077]], N-acetyl-D-galactosamine degradation:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[LACTOSECAT-PWY]], lactose and galactose degradation I:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR102233
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22949 22949]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16509 16509]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01069 R01069]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00522 R00522]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tagatose-1,6-bisphosphate aldolase}}
+
{{#set: common-name=oxalate decarboxylase}}
−
{{#set: ec-number=ec-4.1.2.40}}
+
{{#set: ec-number=ec-4.1.1.2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction OXALATE-DECARBOXYLASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • oxalate decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6698, oxalate degradation V:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR102233
  • RHEA:
  • LIGAND-RXN:





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