Difference between revisions of "OXALO-SUCCINATE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOKIN-RXN GALACTOKIN-RXN] == * direction: ** reversible * common-name: ** galactokinase * ec-n...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.3.17-RXN 4.1.3.17-RXN] == * direction: ** left-to-right * common-name: ** 4-hydroxy-4-methyl-2-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOKIN-RXN GALACTOKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.3.17-RXN 4.1.3.17-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** galactokinase
+
** 4-hydroxy-4-methyl-2-oxoglutarate aldolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]
+
** [http://enzyme.expasy.org/EC/4.1.3.17 ec-4.1.3.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[PROTON]][c]
+
* 2 [[PYRUVATE]][c] '''=>''' 1 [[CPD-187]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19552]]
+
* Gene: [[SJ13180]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13010]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17935]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
+
* [[PWY-7701]], 4-hydroxy-4-methyl-L-glutamate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7701 PWY-7701]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-3821]], D-galactose detoxification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13556 13556]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22751 22751]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00008 R00008]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P09608 P09608]
+
{{#set: common-name=4-hydroxy-4-methyl-2-oxoglutarate aldolase}}
−
** [http://www.uniprot.org/uniprot/Q01415 Q01415]
+
{{#set: ec-number=ec-4.1.3.17}}
−
** [http://www.uniprot.org/uniprot/P22713 P22713]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P31767 P31767]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P96993 P96993]
 
−
** [http://www.uniprot.org/uniprot/P04385 P04385]
 
−
** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
 
−
** [http://www.uniprot.org/uniprot/P13227 P13227]
 
−
** [http://www.uniprot.org/uniprot/P39574 P39574]
 
−
** [http://www.uniprot.org/uniprot/P13045 P13045]
 
−
** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=galactokinase}}
 
−
{{#set: ec-number=ec-2.7.1.6}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction 4.1.3.17-RXN

  • direction:
    • left-to-right
  • common-name:
    • 4-hydroxy-4-methyl-2-oxoglutarate aldolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7701, 4-hydroxy-4-methyl-L-glutamate biosynthesis: PWY-7701
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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