Difference between revisions of "Octadec-2-enoyl-ACPs"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVIN-SYN-RXN RIBOFLAVIN-SYN-RXN] == * direction: ** left-to-right * common-name: ** riboflavi...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7673 RXN-7673] == * direction: ** reversible * common-name: ** chlorophyllide b:geranyl-geranyl...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVIN-SYN-RXN RIBOFLAVIN-SYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7673 RXN-7673] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** riboflavin synthase
+
** chlorophyllide b:geranyl-geranyl diphosphate geranyl-geranyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.9 ec-2.5.1.9]
+
** [http://enzyme.expasy.org/EC/2.5.1.62 ec-2.5.1.62]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''+''' 1 [[RIBOFLAVIN]][c]
+
* 1 [[CPD-7014]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[CPD-7013]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11166]]
+
* Gene: [[SJ07213]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
 
−
** '''5''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=reversible}}
−
* RHEA:
+
{{#set: common-name=chlorophyllide b:geranyl-geranyl diphosphate geranyl-geranyltransferase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20773 20773]
+
{{#set: ec-number=ec-2.5.1.62}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00066 R00066]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P11998 P11998]
 
−
** [http://www.uniprot.org/uniprot/P16440 P16440]
 
−
** [http://www.uniprot.org/uniprot/Q9JUA6 Q9JUA6]
 
−
** [http://www.uniprot.org/uniprot/O24854 O24854]
 
−
** [http://www.uniprot.org/uniprot/O26237 O26237]
 
−
** [http://www.uniprot.org/uniprot/P66037 P66037]
 
−
** [http://www.uniprot.org/uniprot/Q9CGU8 Q9CGU8]
 
−
** [http://www.uniprot.org/uniprot/Q9YDC5 Q9YDC5]
 
−
** [http://www.uniprot.org/uniprot/Q9PN77 Q9PN77]
 
−
** [http://www.uniprot.org/uniprot/Q9CGU6 Q9CGU6]
 
−
** [http://www.uniprot.org/uniprot/P45273 P45273]
 
−
** [http://www.uniprot.org/uniprot/Q9PIB9 Q9PIB9]
 
−
** [http://www.uniprot.org/uniprot/O66529 O66529]
 
−
** [http://www.uniprot.org/uniprot/Q58584 Q58584]
 
−
** [http://www.uniprot.org/uniprot/O28856 O28856]
 
−
** [http://www.uniprot.org/uniprot/Q01994 Q01994]
 
−
** [http://www.uniprot.org/uniprot/P61714 P61714]
 
−
** [http://www.uniprot.org/uniprot/P0AFU8 P0AFU8]
 
−
** [http://www.uniprot.org/uniprot/P38145 P38145]
 
−
** [http://www.uniprot.org/uniprot/Q55532 Q55532]
 
−
** [http://www.uniprot.org/uniprot/P73527 P73527]
 
−
** [http://www.uniprot.org/uniprot/Q44680 Q44680]
 
−
** [http://www.uniprot.org/uniprot/Q44681 Q44681]
 
−
** [http://www.uniprot.org/uniprot/P50854 P50854]
 
−
** [http://www.uniprot.org/uniprot/P50856 P50856]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=riboflavin synthase}}
 
−
{{#set: ec-number=ec-2.5.1.9}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-7673

  • direction:
    • reversible
  • common-name:
    • chlorophyllide b:geranyl-geranyl diphosphate geranyl-geranyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=Octadec-2-enoyl-ACPs&oldid=34470"