Difference between revisions of "P-COUMAROYL-COA"

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(Created page with "Category:gene == Gene SJ02939 == * transcription-direction: ** negative * right-end-position: ** 125843 * left-end-position: ** 119155 * centisome-position: ** 93.59217...")
(Created page with "Category:gene == Gene SJ12484 == * transcription-direction: ** positive * right-end-position: ** 434380 * left-end-position: ** 416145 * centisome-position: ** 55.524498...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02939 ==
+
== Gene SJ12484 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 125843
+
** 434380
 
* left-end-position:
 
* left-end-position:
−
** 119155
+
** 416145
 
* centisome-position:
 
* centisome-position:
−
** 93.59217    
+
** 55.524498    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[3.2.1.96-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=positive}}
−
* [[RXN-11135]]
+
{{#set: right-end-position=434380}}
−
** Category: [[annotation]]
+
{{#set: left-end-position=416145}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=55.524498   }}
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7210]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7198]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7184]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6545]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=125843}}
 
−
{{#set: left-end-position=119155}}
 
−
{{#set: centisome-position=93.59217   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=4}}
 

Revision as of 09:27, 27 August 2019

Gene SJ12484

  • transcription-direction:
    • positive
  • right-end-position:
    • 434380
  • left-end-position:
    • 416145
  • centisome-position:
    • 55.524498

Organism(s) associated with this gene

Reaction(s) associated




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