Difference between revisions of "PANTEPADENYLYLTRAN-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN] == * direction: ** lef...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16097 RXN-16097] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16097 RXN-16097] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** inositol-3-phosphate synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.5.1.4 ec-5.5.1.4]
+
** [http://enzyme.expasy.org/EC/1.3.1.93 ec-1.3.1.93]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-glucopyranose-6-phosphate]][c] '''=>''' 1 [[1-L-MYO-INOSITOL-1-P]][c]
+
* 1 [[CPD-17348]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-12646]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17716]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ03230]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ22198]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4661]], 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4661 PWY-4661]
+
* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6372]], 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6372 PWY-6372]
+
* [[PWY-6598]], sciadonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-2301]], myo-inositol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2301 PWY-2301]
+
* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6664]], di-myo-inositol phosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6664 PWY-6664]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6580]], phosphatidylinositol biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6580 PWY-6580]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY1G-0]], mycothiol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1G-0 PWY1G-0]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10717 10717]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07324 R07324]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P42800 P42800]
 
−
** [http://www.uniprot.org/uniprot/P42802 P42802]
 
−
** [http://www.uniprot.org/uniprot/P42803 P42803]
 
−
** [http://www.uniprot.org/uniprot/Q9FPK7 Q9FPK7]
 
−
** [http://www.uniprot.org/uniprot/O65195 O65195]
 
−
** [http://www.uniprot.org/uniprot/P42801 P42801]
 
−
** [http://www.uniprot.org/uniprot/Q96348 Q96348]
 
−
** [http://www.uniprot.org/uniprot/Q41107 Q41107]
 
−
** [http://www.uniprot.org/uniprot/Q40271 Q40271]
 
−
** [http://www.uniprot.org/uniprot/Q18664 Q18664]
 
−
** [http://www.uniprot.org/uniprot/Q9LX12 Q9LX12]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=inositol-3-phosphate synthase}}
+
{{#set: ec-number=ec-1.3.1.93}}
−
{{#set: ec-number=ec-5.5.1.4}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:31, 27 August 2019

Reaction RXN-16097

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals): PWY-7725
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6598, sciadonate biosynthesis: PWY-6598
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): PWY-7601
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=PANTEPADENYLYLTRAN-RXN&oldid=36989"