Difference between revisions of "PANTOTHENATE-KIN-RXN"

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(Created page with "Category:reaction == Reaction 2.4.1.123-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.123 ec-2.4.1.123] == Reaction formula == *...")
(Created page with "Category:reaction == Reaction ALLANTOICASE-RXN == * direction: ** left-to-right * common-name: ** allantoicase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.3.4 ec-3.5....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.4.1.123-RXN ==
+
== Reaction ALLANTOICASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** allantoicase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.123 ec-2.4.1.123]
+
** [http://enzyme.expasy.org/EC/3.5.3.4 ec-3.5.3.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-14553]][c] '''+''' 1 [[MYO-INOSITOL]][c] '''=>''' 1 [[CPD-458]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[ALLANTOATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1091]][c] '''+''' 1 [[UREA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20314]]
+
* Gene: [[SJ11493]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5337]], stachyose biosynthesis:
+
* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6524]], lychnose and isolychnose biosynthesis:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6525]], stellariose and mediose biosynthesis:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12465 12465]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11017 11017]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01192 R01192]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02422 R02422]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P18407 P18407]
 +
** [http://www.uniprot.org/uniprot/P25335 P25335]
 +
** [http://www.uniprot.org/uniprot/Q09913 Q09913]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.4.1.123}}
+
{{#set: common-name=allantoicase}}
 +
{{#set: ec-number=ec-3.5.3.4}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:32, 5 January 2021

Reaction ALLANTOICASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • allantoicase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5697, allantoin degradation to ureidoglycolate I (urea producing):
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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