Difference between revisions of "PAPS"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPPHOSPHORIBOSYLTRANS-RXN ATPPHOSPHORIBOSYLTRANS-RXN] == * direction: ** reversible * common-name:...")
 
(Created page with "Category:metabolite == Metabolite PAPS == * common-name: ** 3'-phosphoadenylyl-sulfate * smiles: ** c(op(=o)([o-])os(=o)(=o)[o-])c1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPPHOSPHORIBOSYLTRANS-RXN ATPPHOSPHORIBOSYLTRANS-RXN] ==
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== Metabolite PAPS ==
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* direction:
 
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** reversible
 
 
* common-name:
 
* common-name:
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** atp phosphoribosyltransferase
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** 3'-phosphoadenylyl-sulfate
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/2.4.2.17 ec-2.4.2.17]
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** c(op(=o)([o-])os(=o)(=o)[o-])c1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23)))
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== Reaction formula ==
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* inchi-key:
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* 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PRPP]][c]
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** gacdqmdrprgctn-kqynxxcusa-j
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ19466]]
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** 503.23
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
 
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** '''10''' reactions found over '''10''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* RHEA:
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* [[1.8.4.8-RXN]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18476 18476]
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* [[2.8.2.23-RXN]]
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* LIGAND-RXN:
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* [[2.8.2.29-RXN]]
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** [http://www.genome.jp/dbget-bin/www_bget?R01071 R01071]
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* [[2.8.2.30-RXN]]
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* UNIPROT:
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* [[ADENYLYLSULFKIN-RXN]]
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** [http://www.uniprot.org/uniprot/Q9X0D2 Q9X0D2]
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* [[ARYL-SULFOTRANSFERASE-RXN]]
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** [http://www.uniprot.org/uniprot/Q58601 Q58601]
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* [[ARYLAMINE-SULFOTRANSFERASE-RXN]]
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** [http://www.uniprot.org/uniprot/O34520 O34520]
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* [[CHONDROITIN-4-SULFOTRANSFERASE-RXN]]
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** [http://www.uniprot.org/uniprot/Q9RUE2 Q9RUE2]
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* [[GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN]]
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** [http://www.uniprot.org/uniprot/P64347 P64347]
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* [[HEPARITIN-SULFOTRANSFERASE-RXN]]
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** [http://www.uniprot.org/uniprot/Q9PM78 Q9PM78]
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* [[PAPSPAPthr]]
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** [http://www.uniprot.org/uniprot/Q02129 Q02129]
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* [[R163-RXN]]
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** [http://www.uniprot.org/uniprot/P43853 P43853]
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* [[RXN-10614]]
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** [http://www.uniprot.org/uniprot/O67543 O67543]
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* [[RXN-10615]]
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** [http://www.uniprot.org/uniprot/P40373 P40373]
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* [[RXN-10777]]
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** [http://www.uniprot.org/uniprot/P46586 P46586]
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* [[RXN-10782]]
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** [http://www.uniprot.org/uniprot/Q55503 Q55503]
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* [[RXN-11058]]
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** [http://www.uniprot.org/uniprot/Q9S762 Q9S762]
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* [[RXN-11059]]
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** [http://www.uniprot.org/uniprot/P00498 P00498]
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* [[RXN-11555]]
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** [http://www.uniprot.org/uniprot/P00499 P00499]
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* [[RXN-15587]]
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** [http://www.uniprot.org/uniprot/P60757 P60757]
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* [[RXN-15588]]
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* [[RXN-15589]]
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* [[RXN-17203]]
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* [[RXN-18301]]
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* [[RXN-18303]]
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* [[RXN-701]]
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* [[RXN-7953]]
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* [[RXN-7954]]
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* [[RXN6666-9]]
 
</div>
 
</div>
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{{#set: direction=reversible}}
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== Reaction(s) known to produce the compound ==
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{{#set: common-name=atp phosphoribosyltransferase}}
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* [[1.8.4.8-RXN]]
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{{#set: ec-number=ec-2.4.2.17}}
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* [[ADENYLYLSULFKIN-RXN]]
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{{#set: nb gene associated=1}}
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* [[ARYLAMINE-SULFOTRANSFERASE-RXN]]
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{{#set: nb pathway associated=1}}
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* [[PAPSPAPthr]]
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{{#set: reconstruction category=orthology|annotation}}
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* [[R163-RXN]]
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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* [[RXN-15587]]
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{{#set: reconstruction comment=n.a}}
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* [[RXN-15588]]
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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* [[RXN-15589]]
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* [[RXN-17203]]
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* [[RXN-701]]
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== Reaction(s) of unknown directionality ==
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{{#set: common-name=3'-phosphoadenylyl-sulfate}}
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{{#set: inchi-key=inchikey=gacdqmdrprgctn-kqynxxcusa-j}}
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{{#set: molecular-weight=503.23}}

Latest revision as of 11:17, 18 March 2021

Metabolite PAPS

  • common-name:
    • 3'-phosphoadenylyl-sulfate
  • smiles:
    • c(op(=o)([o-])os(=o)(=o)[o-])c1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23)))
  • inchi-key:
    • gacdqmdrprgctn-kqynxxcusa-j
  • molecular-weight:
    • 503.23

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=PAPS&oldid=139715"