Difference between revisions of "PEPPIth"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-201174 tax-...") |
(Created page with "Category:reaction == Reaction RXN-11361 == * direction: ** left-to-right * common-name: ** molybdopterin-synthase adenylyltransferase * ec-number: ** [http://enzyme.expasy...") |
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| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction RXN-11361 == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** molybdopterin-synthase adenylyltransferase |
| − | == Reaction | + | * ec-number: |
| − | * [[ | + | ** [http://enzyme.expasy.org/EC/2.7.7.80 ec-2.7.7.80] |
| − | + | == Reaction formula == | |
| − | == | + | * 1 [[ATP]][c] '''+''' 1 [[MPT-Synthase-small-subunits]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Carboxyadenylated-MPT-synthases]][c] '''+''' 1 [[PPI]][c] |
| − | * [ | + | == Gene(s) associated with this reaction == |
| − | * [ | + | * Gene: [[SJ12357]] |
| − | * [ | + | ** Category: [[annotation]] |
| − | * [ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * [ | + | * Gene: [[SJ06337]] |
| − | * [ | + | ** Category: [[annotation]] |
| − | * | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * [ | + | ** Category: [[orthology]] |
| − | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
| − | * [ | + | == Pathway(s) == |
| − | + | * [[PWY-6823]], molybdenum cofactor biosynthesis: | |
| − | * | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
| − | * [http:// | + | == Reconstruction information == |
| − | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | |
| − | {{#set: | + | == External links == |
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43617 43617] |
| − | {{#set: | + | {{#set: direction=left-to-right}} |
| − | {{#set: | + | {{#set: common-name=molybdopterin-synthase adenylyltransferase}} |
| + | {{#set: ec-number=ec-2.7.7.80}} | ||
| + | {{#set: nb gene associated=2}} | ||
| + | {{#set: nb pathway associated=1}} | ||
| + | {{#set: reconstruction category=annotation|orthology}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | ||
Revision as of 20:44, 18 December 2020
Contents
Reaction RXN-11361
- direction:
- left-to-right
- common-name:
- molybdopterin-synthase adenylyltransferase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 MPT-Synthase-small-subunits[c] + 1 PROTON[c] => 1 Carboxyadenylated-MPT-synthases[c] + 1 PPI[c]
Gene(s) associated with this reaction
- Gene: SJ12357
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ06337
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6823, molybdenum cofactor biosynthesis:
- 7 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
