Difference between revisions of "PEPTIDYLPROLYL-ISOMERASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] == * direction: ** left-to-right * common-name: ** glycerophosph...")
(Created page with "Category:reaction == Reaction RXN-14801 == * direction: ** left-to-right * common-name: ** trans--2-enoyl-coa hydratase 2 * ec-number: ** [http://enzyme.expasy.org/EC/4.2....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] ==
+
== Reaction RXN-14801 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glycerophosphoryl diester phosphodiesterase, periplasmic
+
** trans--2-enoyl-coa hydratase 2
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Glycerophosphodiesters]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-15689]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-15690]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16458]]
+
* Gene: [[SJ04769]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ03584]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00999]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6952]], glycerophosphodiester degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6952 PWY-6952]
+
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12970 12970]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00857 R00857]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q99387 Q99387]
 
−
** [http://www.uniprot.org/uniprot/P10908 P10908]
 
−
** [http://www.uniprot.org/uniprot/Q06282 Q06282]
 
−
** [http://www.uniprot.org/uniprot/Q9V208 Q9V208]
 
−
** [http://www.uniprot.org/uniprot/P09394 P09394]
 
−
** [http://www.uniprot.org/uniprot/Q9S3K5 Q9S3K5]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glycerophosphoryl diester phosphodiesterase, periplasmic}}
+
{{#set: common-name=trans--2-enoyl-coa hydratase 2}}
−
{{#set: ec-number=ec-3.1.4.46}}
+
{{#set: ec-number=ec-4.2.1.119}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:41, 18 December 2020

Reaction RXN-14801

  • direction:
    • left-to-right
  • common-name:
    • trans--2-enoyl-coa hydratase 2
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast):
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=PEPTIDYLPROLYL-ISOMERASE-RXN&oldid=49949"