Difference between revisions of "PGIA"

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(Created page with "Category:reaction == Reaction MALATE-DEHYDROGENASE-NADP+-RXN == * direction: ** left-to-right * common-name: ** malate dehydrogenase (nadp+) * ec-number: ** [http://enzyme...")
(Created page with "Category:reaction == Reaction PGIA == * direction: ** reversible * common-name: ** glucose-6-phosphate isomerase (g6p-a) == Reaction formula == * 1.0 ALPHA-GLC-6-P[c]...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction MALATE-DEHYDROGENASE-NADP+-RXN ==
+
== Reaction PGIA ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** malate dehydrogenase (nadp+)
+
** glucose-6-phosphate isomerase (g6p-a)
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.82 ec-1.1.1.82]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MAL]][c] '''+''' 1 [[NADP]][c]
+
* 1.0 [[ALPHA-GLC-6-P]][c] '''<=>''' 1.0 [[FRUCTOSE-6P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05075]]
+
* Gene: [[SJ08179]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00085]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
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{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00343 R00343]
+
{{#set: common-name=glucose-6-phosphate isomerase (g6p-a)}}
−
* UNIPROT:
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/P15719 P15719]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P17606 P17606]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q43830 Q43830]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P37229 P37229]
 
−
** [http://www.uniprot.org/uniprot/Q05145 Q05145]
 
−
** [http://www.uniprot.org/uniprot/P21528 P21528]
 
−
** [http://www.uniprot.org/uniprot/P52426 P52426]
 
−
** [http://www.uniprot.org/uniprot/Q08062 Q08062]
 
−
** [http://www.uniprot.org/uniprot/P93104 P93104]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=malate dehydrogenase (nadp+)}}
 
−
{{#set: ec-number=ec-1.1.1.82}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:22, 18 March 2021

Reaction PGIA

  • direction:
    • reversible
  • common-name:
    • glucose-6-phosphate isomerase (g6p-a)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=PGIA&oldid=141840"