Difference between revisions of "PGMTh"

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(Created page with "Category:reaction == Reaction ACOA80OR == * direction: ** left-to-right * common-name: ** octanoyl-coa:oxygen 2-oxidoreductase == Reaction formula == * 1.0 CPD-196[x]...")
(Created page with "Category:reaction == Reaction 3.2.1.6-RXN == * direction: ** left-to-right * common-name: ** glucan endo-1,3-beta-glucanase activity, c-3 substituted reducing group * ec-n...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ACOA80OR ==
+
== Reaction 3.2.1.6-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** octanoyl-coa:oxygen 2-oxidoreductase
+
** glucan endo-1,3-beta-glucanase activity, c-3 substituted reducing group
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.2.1.6 ec-3.2.1.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[CPD-196]][x] '''+''' 1.0 [[FAD]][x] '''=>''' 1.0 [[CPD0-2108]][x] '''+''' 1.0 [[FADH2]][x]
+
* 1 [[Beta-D-glucan-w-C-3-substitution]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Beta-D-Glucans]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13468]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ11958]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ07909]]
+
* Gene: [[SJ10147]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02111]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06638]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14972]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14973]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02113]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02112]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115386
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9SSU7 Q9SSU7]
 +
** [http://www.uniprot.org/uniprot/P29716 P29716]
 +
** [http://www.uniprot.org/uniprot/Q59328 Q59328]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=octanoyl-coa:oxygen 2-oxidoreductase}}
+
{{#set: common-name=glucan endo-1,3-beta-glucanase activity, c-3 substituted reducing group}}
−
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-3.2.1.6}}
 +
{{#set: nb gene associated=8}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:39, 15 March 2021

Reaction 3.2.1.6-RXN

  • direction:
    • left-to-right
  • common-name:
    • glucan endo-1,3-beta-glucanase activity, c-3 substituted reducing group
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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