Difference between revisions of "PGPPHOSPHA-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction PGPPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** phosphatidylglycerophosphatase * ec-number: ** [http://enzyme.expasy.org/EC...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531] ==
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== Reaction PGPPHOSPHA-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** 3,8-divinyl-chlorophyllide a biosynthesis ii (anaerobic)
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** phosphatidylglycerophosphatase
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== Reaction(s) found ==
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* ec-number:
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* [[HEMN-RXN]]
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** [http://enzyme.expasy.org/EC/3.1.3.27 ec-3.1.3.27]
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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== Reaction formula ==
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* [[RXN1F-20]]
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* 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL]][c] '''+''' 1 [[Pi]][c]
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* [[UROGENDECARBOX-RXN]]
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== Gene(s) associated with this reaction  ==
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== Reaction(s) not found ==
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* Gene: [[SJ19931]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8797 RXN-8797]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8798 RXN-8798]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17485 RXN-17485]
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* Gene: [[SJ14627]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8799 RXN-8799]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6259 RXN0-6259]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: taxonomic-range=tax-2}}
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== Pathway(s) ==
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{{#set: common-name=3,8-divinyl-chlorophyllide a biosynthesis ii (anaerobic)}}
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* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic):
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{{#set: nb reaction found=4}}
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** '''3''' reactions found over '''2''' reactions in the full pathway
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{{#set: completion rate=0.44}}
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus):
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{{#set: nb total reaction=9}}
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** '''6''' reactions found over '''16''' reactions in the full pathway
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* [[PWY0-1545]], cardiolipin biosynthesis III:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5269]], cardiolipin biosynthesis II:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5668]], cardiolipin biosynthesis I:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic):
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** '''3''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR116119
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16725 16725]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02029 R02029]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P18200 P18200]
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** [http://www.uniprot.org/uniprot/Q9JRA8 Q9JRA8]
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** [http://www.uniprot.org/uniprot/Q9PM65 Q9PM65]
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** [http://www.uniprot.org/uniprot/P0A924 P0A924]
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{{#set: direction=left-to-right}}
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{{#set: common-name=phosphatidylglycerophosphatase}}
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{{#set: ec-number=ec-3.1.3.27}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=6}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction PGPPHOSPHA-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphatidylglycerophosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY4FS-7, phosphatidylglycerol biosynthesis I (plastidic):
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus):
    • 6 reactions found over 16 reactions in the full pathway
  • PWY0-1545, cardiolipin biosynthesis III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5269, cardiolipin biosynthesis II:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5668, cardiolipin biosynthesis I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY4FS-8, phosphatidylglycerol biosynthesis II (non-plastidic):
    • 3 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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