Difference between revisions of "PGPPHOSPHA-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-8299 == * direction: ** left-to-right * common-name: ** 1-18:2-2-16:2-monogalactosyldiacylglycerol desaturase * ec-number: ** [http://enz...") |
(Created page with "Category:reaction == Reaction PGPPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** phosphatidylglycerophosphatase * ec-number: ** [http://enzyme.expasy.org/EC...") |
||
(3 intermediate revisions by one other user not shown) | |||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction PGPPHOSPHA-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** phosphatidylglycerophosphatase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/3.1.3.27 ec-3.1.3.27] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ19931]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ14627]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): |
− | ** '''16''' reactions found over ''' | + | ** '''3''' reactions found over '''2''' reactions in the full pathway |
+ | * [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): | ||
+ | ** '''6''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[PWY0-1545]], cardiolipin biosynthesis III: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5269]], cardiolipin biosynthesis II: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5668]], cardiolipin biosynthesis I: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): | ||
+ | ** '''3''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR116119 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16725 16725] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02029 R02029] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P18200 P18200] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JRA8 Q9JRA8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PM65 Q9PM65] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A924 P0A924] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=phosphatidylglycerophosphatase}} |
− | {{#set: ec-number=ec-1. | + | {{#set: ec-number=ec-3.1.3.27}} |
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} |
Latest revision as of 11:23, 18 March 2021
Contents
Reaction PGPPHOSPHA-RXN
- direction:
- left-to-right
- common-name:
- phosphatidylglycerophosphatase
- ec-number:
Reaction formula
- 1 L-1-PHOSPHATIDYL-GLYCEROL-P[c] + 1 WATER[c] => 1 L-1-PHOSPHATIDYL-GLYCEROL[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ19931
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ14627
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY4FS-7, phosphatidylglycerol biosynthesis I (plastidic):
- 3 reactions found over 2 reactions in the full pathway
- PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus):
- 6 reactions found over 16 reactions in the full pathway
- PWY0-1545, cardiolipin biosynthesis III:
- 2 reactions found over 3 reactions in the full pathway
- PWY-5269, cardiolipin biosynthesis II:
- 3 reactions found over 3 reactions in the full pathway
- PWY-5668, cardiolipin biosynthesis I:
- 3 reactions found over 3 reactions in the full pathway
- PWY4FS-8, phosphatidylglycerol biosynthesis II (non-plastidic):
- 3 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links