Difference between revisions of "PHENYLALANINE--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction PHOSACETYLTRANS-RXN == * direction: ** reversible * common-name: ** phosphate acetyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction ATDGM == * direction: ** left-to-right * common-name: ** atp:dgmp phosphotransferase == Reaction formula == * 1.0 ATP[c] '''+''' 1.0 DG...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PHOSACETYLTRANS-RXN ==
+
== Reaction ATDGM ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphate acetyltransferase
+
** atp:dgmp phosphotransferase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.3.1.8 ec-2.3.1.8]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYL-COA]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[ACETYL-P]][c] '''+''' 1 [[CO-A]][c]
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* 1.0 [[ATP]][c] '''+''' 1.0 [[DGMP]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[DGDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07682]]
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* Gene: [[SJ04335]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ04728]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-5482]], pyruvate fermentation to acetate II:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY0-1312]], acetate and ATP formation from acetyl-CoA I:
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P122-PWY]], heterolactic fermentation:
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[P163-PWY]], L-lysine fermentation to acetate and butanoate:
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5485]], pyruvate fermentation to acetate IV:
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]], mixed acid fermentation:
 
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** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[P3-PWY]], gallate degradation III (anaerobic):
 
−
** '''3''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii):
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[METH-ACETATE-PWY]], methanogenesis from acetate:
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-1281]], sulfoacetaldehyde degradation I:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6637]], sulfolactate degradation II:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P161-PWY]], acetylene degradation (anaerobic):
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19524 19524]
+
{{#set: common-name=atp:dgmp phosphotransferase}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=1}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00230 R00230]
+
{{#set: nb pathway associated=0}}
−
* UNIPROT:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/P38503 P38503]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P47541 P47541]
 
−
** [http://www.uniprot.org/uniprot/P45107 P45107]
 
−
** [http://www.uniprot.org/uniprot/Q9PPL9 Q9PPL9]
 
−
** [http://www.uniprot.org/uniprot/Q9CF22 Q9CF22]
 
−
** [http://www.uniprot.org/uniprot/P0A9M8 P0A9M8]
 
−
** [http://www.uniprot.org/uniprot/Q9RY77 Q9RY77]
 
−
** [http://www.uniprot.org/uniprot/P75359 P75359]
 
−
** [http://www.uniprot.org/uniprot/P73662 P73662]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=phosphate acetyltransferase}}
 
−
{{#set: ec-number=ec-2.3.1.8}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=13}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 08:33, 15 March 2021

Reaction ATDGM

  • direction:
    • left-to-right
  • common-name:
    • atp:dgmp phosphotransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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