Difference between revisions of "PHOSCHOL-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7382 PWY-7382] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...")
(Created page with "Category:reaction == Reaction PHOSCHOL-RXN == * direction: ** left-to-right * common-name: ** n-acylphosphatidylethanolamine-specific phospholipase d * ec-number: ** [http...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7382 PWY-7382] ==
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== Reaction PHOSCHOL-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
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** left-to-right
 
* common-name:
 
* common-name:
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** lipoate biosynthesis and incorporation (yeast)
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** n-acylphosphatidylethanolamine-specific phospholipase d
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-13037]]
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** [http://enzyme.expasy.org/EC/3.1.4.4 ec-3.1.4.4]
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* [[RXN-14950]]
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== Reaction formula ==
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* [[RXN-14957]]
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* 1 [[PHOSPHATIDYLCHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CHOLINE]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-14959]]
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== Gene(s) associated with this reaction  ==
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== Reaction(s) not found ==
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* Gene: [[SJ08019]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14954 RXN-14954]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14958 RXN-14958]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14955 RXN-14955]
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** Category: [[orthology]]
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{{#set: taxonomic-range=tax-4751}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=lipoate biosynthesis and incorporation (yeast)}}
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== Pathway(s) ==
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{{#set: nb reaction found=4}}
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* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule:
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{{#set: completion rate=0.57}}
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** '''4''' reactions found over '''5''' reactions in the full pathway
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{{#set: nb total reaction=7}}
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* [[PWY-3561]], choline biosynthesis III:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[LIPASYN-PWY]], phospholipases:
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR116125
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14446 14446]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01310 R01310]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P20626 P20626]
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** [http://www.uniprot.org/uniprot/Q9Z4Q0 Q9Z4Q0]
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** [http://www.uniprot.org/uniprot/P93844 P93844]
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** [http://www.uniprot.org/uniprot/Q43007 Q43007]
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** [http://www.uniprot.org/uniprot/Q43270 Q43270]
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** [http://www.uniprot.org/uniprot/P93400 P93400]
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** [http://www.uniprot.org/uniprot/Q9T052 Q9T052]
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** [http://www.uniprot.org/uniprot/Q9T053 Q9T053]
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** [http://www.uniprot.org/uniprot/Q41142 Q41142]
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** [http://www.uniprot.org/uniprot/O04865 O04865]
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** [http://www.uniprot.org/uniprot/P70496 P70496]
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** [http://www.uniprot.org/uniprot/O74136 O74136]
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** [http://www.uniprot.org/uniprot/O08684 O08684]
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{{#set: direction=left-to-right}}
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{{#set: common-name=n-acylphosphatidylethanolamine-specific phospholipase d}}
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{{#set: ec-number=ec-3.1.4.4}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction PHOSCHOL-RXN

  • direction:
    • left-to-right
  • common-name:
    • n-acylphosphatidylethanolamine-specific phospholipase d
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7039, phosphatidate metabolism, as a signaling molecule:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-3561, choline biosynthesis III:
    • 3 reactions found over 3 reactions in the full pathway
  • LIPASYN-PWY, phospholipases:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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