Difference between revisions of "PHOSCHOL-RXN"

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(Created page with "Category:reaction == Reaction FADSYN-RXN == * direction: ** left-to-right * common-name: ** fmn adenylyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.2 ec...")
(Created page with "Category:reaction == Reaction PHOSCHOL-RXN == * direction: ** left-to-right * common-name: ** n-acylphosphatidylethanolamine-specific phospholipase d * ec-number: ** [http...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FADSYN-RXN ==
+
== Reaction PHOSCHOL-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** fmn adenylyltransferase
+
** n-acylphosphatidylethanolamine-specific phospholipase d
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.2 ec-2.7.7.2]
+
** [http://enzyme.expasy.org/EC/3.1.4.4 ec-3.1.4.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[FAD]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[PHOSPHATIDYLCHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CHOLINE]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07922]]
+
* Gene: [[SJ08019]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ00206]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ01760]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01107]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-366]], flavin biosynthesis IV (mammalian):
+
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
+
* [[PWY-3561]], choline biosynthesis III:
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6167]], flavin biosynthesis II (archaea):
+
* [[LIPASYN-PWY]], phospholipases:
−
** '''5''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6168]], flavin biosynthesis III (fungi):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR116125
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17238 17238]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14446 14446]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00161 R00161]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01310 R01310]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
+
** [http://www.uniprot.org/uniprot/P20626 P20626]
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
+
** [http://www.uniprot.org/uniprot/Q9Z4Q0 Q9Z4Q0]
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
+
** [http://www.uniprot.org/uniprot/P93844 P93844]
 +
** [http://www.uniprot.org/uniprot/Q43007 Q43007]
 +
** [http://www.uniprot.org/uniprot/Q43270 Q43270]
 +
** [http://www.uniprot.org/uniprot/P93400 P93400]
 +
** [http://www.uniprot.org/uniprot/Q9T052 Q9T052]
 +
** [http://www.uniprot.org/uniprot/Q9T053 Q9T053]
 +
** [http://www.uniprot.org/uniprot/Q41142 Q41142]
 +
** [http://www.uniprot.org/uniprot/O04865 O04865]
 +
** [http://www.uniprot.org/uniprot/P70496 P70496]
 +
** [http://www.uniprot.org/uniprot/O74136 O74136]
 +
** [http://www.uniprot.org/uniprot/O08684 O08684]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=fmn adenylyltransferase}}
+
{{#set: common-name=n-acylphosphatidylethanolamine-specific phospholipase d}}
−
{{#set: ec-number=ec-2.7.7.2}}
+
{{#set: ec-number=ec-3.1.4.4}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction PHOSCHOL-RXN

  • direction:
    • left-to-right
  • common-name:
    • n-acylphosphatidylethanolamine-specific phospholipase d
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7039, phosphatidate metabolism, as a signaling molecule:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-3561, choline biosynthesis III:
    • 3 reactions found over 3 reactions in the full pathway
  • LIPASYN-PWY, phospholipases:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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