Difference between revisions of "PHOSMANMUT-RXN-MANNOSE-1P//MANNOSE-6P.23."

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(Created page with "Category:reaction == Reaction PROTOHEMEFERROCHELAT-RXN == * direction: ** reversible * common-name: ** ferrochelatase * ec-number: ** [http://enzyme.expasy.org/EC/4.99.1.1...")
(Created page with "Category:reaction == Reaction RXN1G-469 == * direction: ** left-to-right * common-name: ** 3-oxobehenoyl-[acyl-carrier protein] reductase ** 3-oxoacyl-[acyl-carrier-protei...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PROTOHEMEFERROCHELAT-RXN ==
+
== Reaction RXN1G-469 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** ferrochelatase
+
** 3-oxobehenoyl-[acyl-carrier protein] reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 +
** 3-oxo-behenoyl-[acp] reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.99.1.1 ec-4.99.1.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[FE+2]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
+
* 1 [[3-oxo-behenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxybehenoyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19310]]
+
* Gene: [[SJ17743]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13014]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ19170]]
+
* Gene: [[SJ04229]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III:
+
* [[PWYG-321]], mycolate biosynthesis:
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''26''' reactions found over '''182''' reactions in the full pathway
−
* [[HEMESYN2-PWY]], heme b biosynthesis II (oxygen-independent):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic):
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=left-to-right}}
−
* RHEA:
+
{{#set: common-name=3-oxobehenoyl-[acyl-carrier protein] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)|3-oxo-behenoyl-[acp] reductase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
+
{{#set: ec-number=ec-1.1.1.100}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=3}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00310 R00310]
+
{{#set: nb pathway associated=1}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P22830 P22830]
 
−
** [http://www.uniprot.org/uniprot/P22315 P22315]
 
−
** [http://www.uniprot.org/uniprot/P28602 P28602]
 
−
** [http://www.uniprot.org/uniprot/Q05338 Q05338]
 
−
** [http://www.uniprot.org/uniprot/P42043 P42043]
 
−
** [http://www.uniprot.org/uniprot/P23871 P23871]
 
−
** [http://www.uniprot.org/uniprot/P32396 P32396]
 
−
** [http://www.uniprot.org/uniprot/Q9CFB4 Q9CFB4]
 
−
** [http://www.uniprot.org/uniprot/P56107 P56107]
 
−
** [http://www.uniprot.org/uniprot/O67083 O67083]
 
−
** [http://www.uniprot.org/uniprot/Q9PI08 Q9PI08]
 
−
** [http://www.uniprot.org/uniprot/Q9JVA5 Q9JVA5]
 
−
** [http://www.uniprot.org/uniprot/P22600 P22600]
 
−
** [http://www.uniprot.org/uniprot/P43868 P43868]
 
−
** [http://www.uniprot.org/uniprot/P16622 P16622]
 
−
** [http://www.uniprot.org/uniprot/Q59735 Q59735]
 
−
** [http://www.uniprot.org/uniprot/P43413 P43413]
 
−
** [http://www.uniprot.org/uniprot/P54225 P54225]
 
−
** [http://www.uniprot.org/uniprot/P42045 P42045]
 
−
** [http://www.uniprot.org/uniprot/O64391 O64391]
 
−
** [http://www.uniprot.org/uniprot/P42044 P42044]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=ferrochelatase}}
 
−
{{#set: ec-number=ec-4.99.1.1}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:01, 14 January 2021

Reaction RXN1G-469

  • direction:
    • left-to-right
  • common-name:
    • 3-oxobehenoyl-[acyl-carrier protein] reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
    • 3-oxo-behenoyl-[acp] reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 26 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "3-oxobehenoyl-[acyl-carrier protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-behenoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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