Difference between revisions of "PHOSMANMUT-RXN-MANNOSE-1P//MANNOSE-6P.23."

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-16627 == * direction: ** left-to-right * common-name: ** (3r,9z)-3-hydroxy-octadec-9-enoyl-[acp] dehydratase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction PROTOHEMEFERROCHELAT-RXN == * direction: ** reversible * common-name: ** ferrochelatase * ec-number: ** [http://enzyme.expasy.org/EC/4.99.1.1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16627 ==
+
== Reaction PROTOHEMEFERROCHELAT-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** (3r,9z)-3-hydroxy-octadec-9-enoyl-[acp] dehydratase
+
** ferrochelatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
+
** [http://enzyme.expasy.org/EC/4.99.1.1 ec-4.99.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3R-9Z-3-hydroxy-octadec-9-enoyl-ACPs]][c] '''=>''' 1 [[2E-9Z-octadeca-2-9-dienoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[FE+2]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10275]]
+
* Gene: [[SJ19310]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19170]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic):
+
* [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III:
−
** '''13''' reactions found over '''14''' reactions in the full pathway
+
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[HEMESYN2-PWY]], heme b biosynthesis II (oxygen-independent):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=(3r,9z)-3-hydroxy-octadec-9-enoyl-[acp] dehydratase}}
+
* RHEA:
−
{{#set: ec-number=ec-4.2.1.59}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
−
{{#set: nb gene associated=1}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00310 R00310]
−
{{#set: reconstruction category=annotation}}
+
* UNIPROT:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P22830 P22830]
 +
** [http://www.uniprot.org/uniprot/P22315 P22315]
 +
** [http://www.uniprot.org/uniprot/P28602 P28602]
 +
** [http://www.uniprot.org/uniprot/Q05338 Q05338]
 +
** [http://www.uniprot.org/uniprot/P42043 P42043]
 +
** [http://www.uniprot.org/uniprot/P23871 P23871]
 +
** [http://www.uniprot.org/uniprot/P32396 P32396]
 +
** [http://www.uniprot.org/uniprot/Q9CFB4 Q9CFB4]
 +
** [http://www.uniprot.org/uniprot/P56107 P56107]
 +
** [http://www.uniprot.org/uniprot/O67083 O67083]
 +
** [http://www.uniprot.org/uniprot/Q9PI08 Q9PI08]
 +
** [http://www.uniprot.org/uniprot/Q9JVA5 Q9JVA5]
 +
** [http://www.uniprot.org/uniprot/P22600 P22600]
 +
** [http://www.uniprot.org/uniprot/P43868 P43868]
 +
** [http://www.uniprot.org/uniprot/P16622 P16622]
 +
** [http://www.uniprot.org/uniprot/Q59735 Q59735]
 +
** [http://www.uniprot.org/uniprot/P43413 P43413]
 +
** [http://www.uniprot.org/uniprot/P54225 P54225]
 +
** [http://www.uniprot.org/uniprot/P42045 P42045]
 +
** [http://www.uniprot.org/uniprot/O64391 O64391]
 +
** [http://www.uniprot.org/uniprot/P42044 P42044]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=ferrochelatase}}
 +
{{#set: ec-number=ec-4.99.1.1}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:15, 14 January 2021

Reaction PROTOHEMEFERROCHELAT-RXN

  • direction:
    • reversible
  • common-name:
    • ferrochelatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1415, superpathway of heme b biosynthesis from uroporphyrinogen-III:
    • 5 reactions found over 4 reactions in the full pathway
  • HEMESYN2-PWY, heme b biosynthesis II (oxygen-independent):
    • 3 reactions found over 4 reactions in the full pathway
  • HEME-BIOSYNTHESIS-II, heme b biosynthesis I (aerobic):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=PHOSMANMUT-RXN-MANNOSE-1P//MANNOSE-6P.23.&oldid=88676"