Difference between revisions of "PHOSPHOGLUCMUT-RXN"

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(Created page with "Category:reaction == Reaction RXN-10059 == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expasy....")
(Created page with "Category:reaction == Reaction PHOSPHOGLUCMUT-RXN == * direction: ** reversible * common-name: ** phosphoglucomutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.2 ec...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10059 ==
+
== Reaction PHOSPHOGLUCMUT-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
** phosphoglucomutase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
+
** [http://enzyme.expasy.org/EC/5.4.2.2 ec-5.4.2.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Lignoceroyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
+
* 1 [[GLC-1-P]][c] '''<=>''' 1 [[D-glucopyranose-6-phosphate]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ05004]]
−
* Gene: [[SJ06617]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ00005]]
+
* Gene: [[SJ18341]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15984]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15983]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ12510]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18059]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ04443]]
+
* Gene: [[SJ02279]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10624]]
+
* Gene: [[SJ12467]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
== Pathway(s)  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6737]], starch degradation V:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7238]], sucrose biosynthesis II:
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose):
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7900]], glycogen biosynthesis III (from &alpha;-maltose 1-phosphate):
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6731]], starch degradation III:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5941]], glycogen degradation II:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]], glycogen degradation I:
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-622]], starch biosynthesis:
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-2723]], trehalose degradation V:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3801]], sucrose degradation II (sucrose synthase):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7343]], UDP-&alpha;-D-glucose biosynthesis:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5940]], streptomycin biosynthesis:
 +
** '''2''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7902]], glucosylglycerol biosynthesis:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5661]], GDP-&alpha;-D-glucose biosynthesis:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-422]]:
 +
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 
</div>
 
</div>
−
== Pathway(s)  ==
 
−
* [[PWY-6113]], superpathway of mycolate biosynthesis:
 
−
** '''8''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWYG-321]], mycolate biosynthesis:
 
−
** '''26''' reactions found over '''205''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR116299
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23539 23539]
−
{{#set: ec-number=ec-2.3.1.41}}
+
* PIR:
−
{{#set: nb gene associated=7}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41801 A41801]
−
{{#set: nb pathway associated=2}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A53614 A53614]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B53614 B53614]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70650 E70650]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64803 G64803]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G81947 G81947]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I39487 I39487]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I41215 I41215]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRB PMRB]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRBI PMRBI]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRT PMRT]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S10741 S10741]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39397 S39397]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41199 S41199]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41200 S41200]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S76847 S76847]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78440 S78440]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04326 T04326]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04327 T04327]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12574 T12574]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52656 T52656]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P36871 P36871]
 +
** [http://www.uniprot.org/uniprot/P40390 P40390]
 +
** [http://www.uniprot.org/uniprot/P40391 P40391]
 +
** [http://www.uniprot.org/uniprot/P95090 P95090]
 +
** [http://www.uniprot.org/uniprot/P36938 P36938]
 +
** [http://www.uniprot.org/uniprot/P57002 P57002]
 +
** [http://www.uniprot.org/uniprot/P38569 P38569]
 +
** [http://www.uniprot.org/uniprot/P31120 P31120]
 +
** [http://www.uniprot.org/uniprot/P00949 P00949]
 +
** [http://www.uniprot.org/uniprot/P38652 P38652]
 +
** [http://www.uniprot.org/uniprot/Q7M2K5 Q7M2K5]
 +
** [http://www.uniprot.org/uniprot/Q16106 Q16106]
 +
** [http://www.uniprot.org/uniprot/P33401 P33401]
 +
** [http://www.uniprot.org/uniprot/P37012 P37012]
 +
** [http://www.uniprot.org/uniprot/P74643 P74643]
 +
** [http://www.uniprot.org/uniprot/Q51847 Q51847]
 +
** [http://www.uniprot.org/uniprot/P93804 P93804]
 +
** [http://www.uniprot.org/uniprot/P93805 P93805]
 +
** [http://www.uniprot.org/uniprot/P93262 P93262]
 +
** [http://www.uniprot.org/uniprot/Q9SCY0 Q9SCY0]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00959 R00959]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=phosphoglucomutase}}
 +
{{#set: ec-number=ec-5.4.2.2}}
 +
{{#set: nb gene associated=5}}
 +
{{#set: nb pathway associated=18}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction PHOSPHOGLUCMUT-RXN

  • direction:
    • reversible
  • common-name:
    • phosphoglucomutase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6737, starch degradation V:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II:
    • 5 reactions found over 8 reactions in the full pathway
  • GLYCOGENSYNTH-PWY, glycogen biosynthesis I (from ADP-D-Glucose):
    • 1 reactions found over 4 reactions in the full pathway
  • GLUCOSE1PMETAB-PWY, glucose and glucose-1-phosphate degradation:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7900, glycogen biosynthesis III (from α-maltose 1-phosphate):
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6731, starch degradation III:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5941, glycogen degradation II:
    • 3 reactions found over 6 reactions in the full pathway
  • GLYCOCAT-PWY, glycogen degradation I:
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-622, starch biosynthesis:
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6317, D-galactose degradation I (Leloir pathway):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-2723, trehalose degradation V:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3801, sucrose degradation II (sucrose synthase):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7343, UDP-α-D-glucose biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5940, streptomycin biosynthesis:
    • 2 reactions found over 18 reactions in the full pathway
  • PWY-7902, glucosylglycerol biosynthesis:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5384, sucrose degradation IV (sucrose phosphorylase):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5661, GDP-α-D-glucose biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-422:
    • 5 reactions found over n.a reactions in the full pathway

Reconstruction information

External links





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