Difference between revisions of "PHYTYL-PYROPHOSPHATE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] == * direction: ** left-to-right * common-name: ** 3,4-d...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12378 RXN-12378] == * direction: ** left-to-right * common-name: ** trna (guanine26-n2-methyltr...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12378 RXN-12378] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3,4-dihydroxy-2-butanone-4-phosphate synthase
+
** trna (guanine26-n2-methyltransferase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.99.12 ec-4.1.99.12]
+
** [http://enzyme.expasy.org/EC/2.1.1.215 ec-2.1.1.215]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[RIBULOSE-5P]][c] '''=>''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Guanine26-Guanine27-in-tRNAs]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNA-Containing-N2-Methylgua-26-Gua27]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17329]]
+
* Gene: [[SJ14807]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09381]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
 
** '''5''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18458 18458]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07281 R07281]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3,4-dihydroxy-2-butanone-4-phosphate synthase}}
+
{{#set: common-name=trna (guanine26-n2-methyltransferase}}
{{#set: ec-number=ec-4.1.99.12}}
+
{{#set: ec-number=ec-2.1.1.215}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-12378

  • direction:
    • left-to-right
  • common-name:
    • trna (guanine26-n2-methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links