Difference between revisions of "POLYNUCLEOTIDE-5-HYDROXYL-KINASE-RXN"

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(Created page with "Category:reaction == Reaction THIOREDOXIN-REDUCT-NADPH-RXN == * direction: ** left-to-right * common-name: ** thioredoxin-disulfide reductase ** thioredoxin reductase * ec...")
(Created page with "Category:reaction == Reaction RXN0-5184 == * direction: ** left-to-right * common-name: ** phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1] =...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction THIOREDOXIN-REDUCT-NADPH-RXN ==
+
== Reaction RXN0-5184 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** thioredoxin-disulfide reductase
+
** phosphorylase
−
** thioredoxin reductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.1.9 ec-1.8.1.9]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Red-Thioredoxin]][c]
+
* 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[GLC-1-P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ18078]]
−
* Gene: [[SJ16329]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06874]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ01778]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ09093]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12278]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21339]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21344]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00293]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08960]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ00760]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04991]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00931]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ16658]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[THIOREDOX-PWY]], thioredoxin pathway:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06050 R06050]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q05741 Q05741]
+
** [http://www.uniprot.org/uniprot/Q9SD76 Q9SD76]
−
** [http://www.uniprot.org/uniprot/P56431 P56431]
+
** [http://www.uniprot.org/uniprot/P53537 P53537]
−
** [http://www.uniprot.org/uniprot/O28718 O28718]
+
** [http://www.uniprot.org/uniprot/Q42863 Q42863]
−
** [http://www.uniprot.org/uniprot/P80880 P80880]
+
** [http://www.uniprot.org/uniprot/P27598 P27598]
−
** [http://www.uniprot.org/uniprot/P43496 P43496]
+
** [http://www.uniprot.org/uniprot/O24363 O24363]
−
** [http://www.uniprot.org/uniprot/P94284 P94284]
+
** [http://www.uniprot.org/uniprot/P73546 P73546]
−
** [http://www.uniprot.org/uniprot/O66790 O66790]
+
** [http://www.uniprot.org/uniprot/P73511 P73511]
−
** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
+
** [http://www.uniprot.org/uniprot/P06738 P06738]
−
** [http://www.uniprot.org/uniprot/P47348 P47348]
+
** [http://www.uniprot.org/uniprot/P39123 P39123]
−
** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
+
** [http://www.uniprot.org/uniprot/P09812 P09812]
−
** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
+
** [http://www.uniprot.org/uniprot/P53535 P53535]
−
** [http://www.uniprot.org/uniprot/O26804 O26804]
+
** [http://www.uniprot.org/uniprot/Q9PSQ9 Q9PSQ9]
−
** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
+
** [http://www.uniprot.org/uniprot/P09811 P09811]
−
** [http://www.uniprot.org/uniprot/P43788 P43788]
+
** [http://www.uniprot.org/uniprot/Q00766 Q00766]
−
** [http://www.uniprot.org/uniprot/Q58931 Q58931]
+
** [http://www.uniprot.org/uniprot/Q7M385 Q7M385]
−
** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
+
** [http://www.uniprot.org/uniprot/P00489 P00489]
−
** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
+
** [http://www.uniprot.org/uniprot/P04045 P04045]
−
** [http://www.uniprot.org/uniprot/P23160 P23160]
+
** [http://www.uniprot.org/uniprot/P00490 P00490]
−
** [http://www.uniprot.org/uniprot/P39916 P39916]
+
** [http://www.uniprot.org/uniprot/P0AC86 P0AC86]
−
** [http://www.uniprot.org/uniprot/Q39242 Q39242]
+
** [http://www.uniprot.org/uniprot/Q9PKE6 Q9PKE6]
−
** [http://www.uniprot.org/uniprot/Q39243 Q39243]
+
** [http://www.uniprot.org/uniprot/Q9CHM8 Q9CHM8]
−
** [http://www.uniprot.org/uniprot/P38816 P38816]
+
** [http://www.uniprot.org/uniprot/P45180 P45180]
−
** [http://www.uniprot.org/uniprot/Q25861 Q25861]
+
** [http://www.uniprot.org/uniprot/Q9Z8N1 Q9Z8N1]
−
** [http://www.uniprot.org/uniprot/P29509 P29509]
+
** [http://www.uniprot.org/uniprot/O84250 O84250]
−
** [http://www.uniprot.org/uniprot/P52213 P52213]
+
** [http://www.uniprot.org/uniprot/P34114 P34114]
−
** [http://www.uniprot.org/uniprot/Q16881 Q16881]
+
** [http://www.uniprot.org/uniprot/P32811 P32811]
−
** [http://www.uniprot.org/uniprot/P75531 P75531]
+
** [http://www.uniprot.org/uniprot/P11216 P11216]
−
** [http://www.uniprot.org/uniprot/P74746 P74746]
+
** [http://www.uniprot.org/uniprot/P11217 P11217]
−
** [http://www.uniprot.org/uniprot/P46843 P46843]
+
** [http://www.uniprot.org/uniprot/P06737 P06737]
−
** [http://www.uniprot.org/uniprot/O54535 O54535]
 
−
** [http://www.uniprot.org/uniprot/Q39951 Q39951]
 
−
** [http://www.uniprot.org/uniprot/Q92375 Q92375]
 
−
** [http://www.uniprot.org/uniprot/P52215 P52215]
 
−
** [http://www.uniprot.org/uniprot/P51978 P51978]
 
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=thioredoxin-disulfide reductase|thioredoxin reductase}}
+
{{#set: common-name=phosphorylase}}
−
{{#set: ec-number=ec-1.8.1.9}}
+
{{#set: ec-number=ec-2.4.1.1}}
−
{{#set: nb gene associated=13}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:07, 14 January 2021

Reaction RXN0-5184

  • direction:
    • left-to-right
  • common-name:
    • phosphorylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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