Difference between revisions of "POLYNUCLEOTIDE-5-HYDROXYL-KINASE-RXN"

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(Created page with "Category:reaction == Reaction RXN0-5184 == * direction: ** left-to-right * common-name: ** phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1] =...")
(Created page with "Category:reaction == Reaction SUCCINYLDIAMINOPIMTRANS-RXN == * direction: ** reversible * common-name: ** n-succinyldiaminopimelate aminotransferase * ec-number: ** [http:...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-5184 ==
+
== Reaction SUCCINYLDIAMINOPIMTRANS-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** phosphorylase
+
** n-succinyldiaminopimelate aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1]
+
** [http://enzyme.expasy.org/EC/2.6.1.17 ec-2.6.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[GLC-1-P]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N-SUCCINYLLL-2-6-DIAMINOPIMELATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[N-SUCCINYL-2-AMINO-6-KETOPIMELATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18078]]
+
* Gene: [[SJ18200]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07216]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08678]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11963 11963]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06050 R06050]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04475 R04475]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9SD76 Q9SD76]
+
{{#set: common-name=n-succinyldiaminopimelate aminotransferase}}
−
** [http://www.uniprot.org/uniprot/P53537 P53537]
+
{{#set: ec-number=ec-2.6.1.17}}
−
** [http://www.uniprot.org/uniprot/Q42863 Q42863]
+
{{#set: nb gene associated=3}}
−
** [http://www.uniprot.org/uniprot/P27598 P27598]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/O24363 O24363]
 
−
** [http://www.uniprot.org/uniprot/P73546 P73546]
 
−
** [http://www.uniprot.org/uniprot/P73511 P73511]
 
−
** [http://www.uniprot.org/uniprot/P06738 P06738]
 
−
** [http://www.uniprot.org/uniprot/P39123 P39123]
 
−
** [http://www.uniprot.org/uniprot/P09812 P09812]
 
−
** [http://www.uniprot.org/uniprot/P53535 P53535]
 
−
** [http://www.uniprot.org/uniprot/Q9PSQ9 Q9PSQ9]
 
−
** [http://www.uniprot.org/uniprot/P09811 P09811]
 
−
** [http://www.uniprot.org/uniprot/Q00766 Q00766]
 
−
** [http://www.uniprot.org/uniprot/Q7M385 Q7M385]
 
−
** [http://www.uniprot.org/uniprot/P00489 P00489]
 
−
** [http://www.uniprot.org/uniprot/P04045 P04045]
 
−
** [http://www.uniprot.org/uniprot/P00490 P00490]
 
−
** [http://www.uniprot.org/uniprot/P0AC86 P0AC86]
 
−
** [http://www.uniprot.org/uniprot/Q9PKE6 Q9PKE6]
 
−
** [http://www.uniprot.org/uniprot/Q9CHM8 Q9CHM8]
 
−
** [http://www.uniprot.org/uniprot/P45180 P45180]
 
−
** [http://www.uniprot.org/uniprot/Q9Z8N1 Q9Z8N1]
 
−
** [http://www.uniprot.org/uniprot/O84250 O84250]
 
−
** [http://www.uniprot.org/uniprot/P34114 P34114]
 
−
** [http://www.uniprot.org/uniprot/P32811 P32811]
 
−
** [http://www.uniprot.org/uniprot/P11216 P11216]
 
−
** [http://www.uniprot.org/uniprot/P11217 P11217]
 
−
** [http://www.uniprot.org/uniprot/P06737 P06737]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=phosphorylase}}
 
−
{{#set: ec-number=ec-2.4.1.1}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:27, 15 January 2021

Reaction SUCCINYLDIAMINOPIMTRANS-RXN

  • direction:
    • reversible
  • common-name:
    • n-succinyldiaminopimelate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • DAPLYSINESYN-PWY, L-lysine biosynthesis I:
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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