Difference between revisions of "POLYNUCLEOTIDE-5-PHOSPHATASE-RXN"

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(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERVAL-RXN == * direction: ** reversible * common-name: ** valine transaminase * ec-number: ** [http://enzyme.expasy....")
(Created page with "Category:reaction == Reaction RXN-10655 == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph) ** 3-oxo-cis-δ7-tetrade...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BRANCHED-CHAINAMINOTRANSFERVAL-RXN ==
+
== Reaction RXN-10655 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** valine transaminase
+
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 +
** 3-oxo-cis-δ7-tetradecenoyl-[acp] reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[VAL]][c] '''<=>''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[3-oxo-cis-D7-tetradecenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-hydroxy-cis-D7-tetraecenoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17677]]
+
* Gene: [[SJ04229]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06412]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ17743]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ04586]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13014]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 24: Line 23:
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[VALSYN-PWY]], L-valine biosynthesis:
+
* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate):
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[ALANINE-VALINESYN-PWY]], L-alanine biosynthesis I:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5057]], L-valine degradation II:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[VALDEG-PWY]], L-valine degradation I:
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24816 24816]
+
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase (nadph)|3-oxo-cis-&delta;7-tetradecenoyl-[acp] reductase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.1.1.100}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01214 R01214]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
 
−
** [http://www.uniprot.org/uniprot/P38891 P38891]
 
−
** [http://www.uniprot.org/uniprot/P47176 P47176]
 
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
 
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
 
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
 
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=valine transaminase}}
 
−
{{#set: ec-number=ec-2.6.1.42}}
 
 
{{#set: nb gene associated=3}}
 
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:05, 14 January 2021

Reaction RXN-10655

  • direction:
    • left-to-right
  • common-name:
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
    • 3-oxo-cis-δ7-tetradecenoyl-[acp] reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-cis-δ7-tetradecenoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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