Difference between revisions of "PPC"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17114 RXN-17114] == * direction: ** left-to-right * common-name: ** (2e,6z,9z,12z,15z,18z)-tetr...")
(Created page with "Category:reaction == Reaction LPLPS1AGPE180h == * direction: ** left-to-right * common-name: ** lysophospholipase (18:0) == Reaction formula == * 1.0 CPD0-2152[h] '''+...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17114 RXN-17114] ==
+
== Reaction LPLPS1AGPE180h ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** (2e,6z,9z,12z,15z,18z)-tetracosahexaenoyl-coa hydratase
+
** lysophospholipase (18:0)
** enoyl-coa hydratase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-18492]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-18493]][c]
+
* 1.0 [[CPD0-2152]][h] '''+''' 1.0 [[WATER]][h] '''=>''' 1.0 [[ALKYL-SN-GLYCERO-PHOSPHOETHANOLAMINE]][h] '''+''' 1.0 [[PROTON]][h] '''+''' 1.0 [[STEARIC_ACID]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ08838]]
* Gene: [[SJ10275]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ21390]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ03584]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ03913]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ14591]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
 
** '''8''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=(2e,6z,9z,12z,15z,18z)-tetracosahexaenoyl-coa hydratase|enoyl-coa hydratase}}
+
{{#set: common-name=lysophospholipase (18:0)}}
{{#set: ec-number=ec-4.2.1.17}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=6}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 20:41, 18 December 2020

Reaction LPLPS1AGPE180h

  • direction:
    • left-to-right
  • common-name:
    • lysophospholipase (18:0)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links