Difference between revisions of "PPGPPSYN-RXN"
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(Created page with "Category:reaction == Reaction RXN-9545 == * direction: ** left-to-right * common-name: ** 3-hydroxystearoyl-dehydratase ** 3-hydroxyacyl-coa dehydrase * ec-number: ** [htt...") |
(Created page with "Category:reaction == Reaction PPGPPSYN-RXN == * direction: ** left-to-right * common-name: ** guanosine-3',5'-bis(diphosphate) 3'-diphosphatase * ec-number: ** [http://enz...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction PPGPPSYN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** 3- | + | ** guanosine-3',5'-bis(diphosphate) 3'-diphosphatase |
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.1.7.2 ec-3.1.7.2] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[GUANOSINE-5DP-3DP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ10100]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ14690]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | * Gene: [[SJ07200]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | * Gene: [[SJ13961]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY | + | * [[PPGPPMET-PWY]], ppGpp metabolism: |
| − | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * METANETX-RXN : | + | * METANETX-RXN : MNXR103109 |
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14254 14254] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00336 R00336] |
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q9PN26 Q9PN26] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JT97 Q9JT97] | ||
| + | ** [http://www.uniprot.org/uniprot/P43811 P43811] | ||
| + | ** [http://www.uniprot.org/uniprot/P0AG24 P0AG24] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name=3- | + | {{#set: common-name=guanosine-3',5'-bis(diphosphate) 3'-diphosphatase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-3.1.7.2}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
Latest revision as of 11:21, 18 March 2021
Contents
Reaction PPGPPSYN-RXN
- direction:
- left-to-right
- common-name:
- guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
- ec-number:
Reaction formula
- 1 GUANOSINE-5DP-3DP[c] + 1 WATER[c] => 1 GDP[c] + 1 PPI[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ10100
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ14690
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ07200
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ13961
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PPGPPMET-PWY, ppGpp metabolism:
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
