Difference between revisions of "PPGPPSYN-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.22.1-RXN 3.4.22.1-RXN] == * direction: ** left-to-right * common-name: ** cathepsin b * ec-numb...")
(Created page with "Category:reaction == Reaction RXN-8642 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** reversible * common-name:...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.22.1-RXN 3.4.22.1-RXN] ==
+
== Reaction RXN-8642 ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** cathepsin b
+
** nadp-dependent isocitrate dehydrogenase
−
* ec-number:
+
* synonymous:
−
** [http://enzyme.expasy.org/EC/3.4.22.1 ec-3.4.22.1]
+
** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 +
** dual-cofactor-specific isocitrate dehydrogenase
 +
** idh (ambiguous)
 +
** isocitrate (nadp) dehydrogenase
 +
** nadp+-icdh
 +
** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 +
** nadp+-idh
 +
** nadp-dependent isocitric dehydrogenase
 +
** nadp-specific isocitrate dehydrogenase
 +
** nadp-linked isocitrate dehydrogenase
 +
** nadp isocitric dehydrogenase
 +
** isocitrate dehydrogenase (nadp-dependent)
 +
** idp
 +
** oxalsuccinic decarboxylase
 +
** idp1
 +
** idp3
 +
** nadp+-linked isocitrate dehydrogenase
 +
** idp2
 +
</div>
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
+
* 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13517]]
+
* Gene: [[SJ08749]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P07688 P07688]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384]
−
** [http://www.uniprot.org/uniprot/P07858 P07858]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P10605 P10605]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268]
−
** [http://www.uniprot.org/uniprot/P00787 P00787]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P43157 P43157]
+
{{#set: common-name=nadp-dependent isocitrate dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/P43233 P43233]
+
{{#set: synonymous=isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|isocitrate (nadp) dehydrogenase|dual-cofactor-specific isocitrate dehydrogenase|nadp-specific isocitrate dehydrogenase|nadp isocitric dehydrogenase|nadp+-icdh|nadp-dependent isocitric dehydrogenase|idp3|idh (ambiguous)|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|idp|idp1|idp2|isocitrate dehydrogenase (nadp-dependent)|oxalsuccinic decarboxylase|nadp-linked isocitrate dehydrogenase|nadp+-idh|nadp+-linked isocitrate dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/Q20950 Q20950]
 
−
** [http://www.uniprot.org/uniprot/P43510 P43510]
 
−
** [http://www.uniprot.org/uniprot/P43509 P43509]
 
−
** [http://www.uniprot.org/uniprot/P43508 P43508]
 
−
** [http://www.uniprot.org/uniprot/P43507 P43507]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=cathepsin b}}
 
−
{{#set: ec-number=ec-3.4.22.1}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:42, 18 December 2020

Reaction RXN-8642

  • direction:
    • reversible
  • common-name:
    • nadp-dependent isocitrate dehydrogenase
  • synonymous:
    • isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
    • dual-cofactor-specific isocitrate dehydrogenase
    • idh (ambiguous)
    • isocitrate (nadp) dehydrogenase
    • nadp+-icdh
    • triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
    • nadp+-idh
    • nadp-dependent isocitric dehydrogenase
    • nadp-specific isocitrate dehydrogenase
    • nadp-linked isocitrate dehydrogenase
    • nadp isocitric dehydrogenase
    • isocitrate dehydrogenase (nadp-dependent)
    • idp
    • oxalsuccinic decarboxylase
    • idp1
    • idp3
    • nadp+-linked isocitrate dehydrogenase
    • idp2

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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