Difference between revisions of "PPI"

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(Created page with "Category:gene == Gene SJ07317 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * PROTEIN-KINASE-RXN **...")
 
(Created page with "Category:gene == Gene SJ10725 == * transcription-direction: ** positive * right-end-position: ** 20834 * left-end-position: ** 12067 * centisome-position: ** 44.146484...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07317 ==
+
== Gene SJ10725 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 20834
 +
* left-end-position:
 +
** 12067
 +
* centisome-position:
 +
** 44.146484   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
* [[DIHYDLIPACETRANS-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PYRUVDEH-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-1133]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-7384]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
 +
** '''3''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7218]]
 +
** '''7''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5482]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5537]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6886]]
 +
** '''8''' reactions found over '''5''' reactions in the full pathway
 +
* [[PYRUVDEHYD-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=20834}}
 +
{{#set: left-end-position=12067}}
 +
{{#set: centisome-position=44.146484    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=7}}

Revision as of 14:24, 26 August 2019

Gene SJ10725

  • transcription-direction:
    • positive
  • right-end-position:
    • 20834
  • left-end-position:
    • 12067
  • centisome-position:
    • 44.146484

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS-TCA-GLYOX-BYPASS
    • 3 reactions found over 1 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway
  • PWY-5482
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5537
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PYRUVDEHYD-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=PPI&oldid=21008"