Difference between revisions of "PPPGO"

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(Created page with "Category:reaction == Reaction 1.4.3.19-RXN == * direction: ** left-to-right * common-name: ** glycine oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.3.19 ec-1.4....")
(Created page with "Category:reaction == Reaction PPPGO == * direction: ** left-to-right * common-name: ** protoporphyrinogen ix oxidase == Reaction formula == * 3.0 OXYGEN-MOLECULE[h] ''...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 1.4.3.19-RXN ==
+
== Reaction PPPGO ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** glycine oxidase
+
** protoporphyrinogen ix oxidase
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.4.3.19 ec-1.4.3.19]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GLY]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[GLYOX]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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* 3.0 [[OXYGEN-MOLECULE]][h] '''+''' 1.0 [[PROTOPORPHYRINOGEN]][h] '''=>''' 3.0 [[HYDROGEN-PEROXIDE]][h] '''+''' 1.0 [[PROTOPORPHYRIN_IX]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17412]]
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* Gene: [[SJ21798]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered):
 
** '''4''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11533 11533]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00366 R00366]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=glycine oxidase}}
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{{#set: common-name=protoporphyrinogen ix oxidase}}
{{#set: ec-number=ec-1.4.3.19}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:23, 18 March 2021

Reaction PPPGO

  • direction:
    • left-to-right
  • common-name:
    • protoporphyrinogen ix oxidase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links