Difference between revisions of "PRAISOM-RXN"

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(Created page with "Category:reaction == Reaction RXN-9235 == * direction: ** left-to-right * common-name: ** ubiquinone biosynthesis methyltransferase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction AUPT == * direction: ** left-to-right * common-name: ** atp:uridine 5'-phosphotransferase == Reaction formula == * 1.0 ATP[c] '''+''' 1.0...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9235 ==
+
== Reaction AUPT ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** ubiquinone biosynthesis methyltransferase
+
** atp:uridine 5'-phosphotransferase
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-9869]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9871]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[ATP]][c] '''+''' 1.0 [[URIDINE]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ02034]]
* Gene: [[SJ02693]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* Gene: [[SJ15690]]
* Gene: [[SJ07072]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00609]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ11757]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20751]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ11297]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02842]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5857]], ubiquinol-10 biosynthesis (prokaryotic):
 
** '''3''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-5872]], ubiquinol-10 biosynthesis (eukaryotic):
 
** '''3''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44765 44765]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=ubiquinone biosynthesis methyltransferase}}
+
{{#set: common-name=atp:uridine 5'-phosphotransferase}}
{{#set: ec-number=ec-2.1.1.201}}
+
{{#set: nb gene associated=2}}
{{#set: nb gene associated=7}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 13:14, 14 January 2021

Reaction AUPT

  • direction:
    • left-to-right
  • common-name:
    • atp:uridine 5'-phosphotransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links