Difference between revisions of "PREGNENOLONE"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ04393 == * transcription-direction: ** positive * right-end-position: ** 12820 * left-end-position: ** 7673 * centisome-position: ** 7.1205845...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11680 RXN-11680] == * direction: ** left-to-right * common-name: ** linoleoyl-lipid 6-desaturas...")
Line 1: Line 1:
−
[[Category:gene]]
+
[[Category:reaction]]
−
== Gene SJ04393 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11680 RXN-11680] ==
−
* transcription-direction:
+
* direction:
−
** positive
+
** left-to-right
−
* right-end-position:
+
* common-name:
−
** 12820
+
** linoleoyl-lipid 6-desaturase
−
* left-end-position:
+
* ec-number:
−
** 7673
+
** [http://enzyme.expasy.org/EC/1.14.19.47 ec-1.14.19.47]
−
* centisome-position:
+
== Reaction formula ==
−
** 7.1205845   
+
* 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[Linoleoyl-groups]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[Gamma-linolenoyl-groups]][c] '''+''' 2 [[WATER]][c]
−
== Organism(s) associated with this gene  ==
+
== Gene(s) associated with this reaction  ==
−
* [[S.japonica_carotenoid_curated]]
+
* Gene: [[SJ05483]]
−
== Reaction(s) associated ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[RXN-14950]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* [[RXN-14957]]
+
== Pathway(s)  ==
−
** Category: [[annotation]]
+
* [[PWY-6603]], dicranin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6603 PWY-6603]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[RXN-14959]]
+
* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
−
** Category: [[annotation]]
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
== Reconstruction information  ==
−
* [[RXN-17127]]
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[annotation]]
+
== External links  ==
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* RHEA:
−
* [[RXN-8654]]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46285 46285]
−
** Category: [[annotation]]
+
* LIGAND-RXN:
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
** [http://www.genome.jp/dbget-bin/www_bget?R07063 R07063]
−
* [[RXN-8655]]
+
{{#set: direction=left-to-right}}
−
** Category: [[annotation]]
+
{{#set: common-name=linoleoyl-lipid 6-desaturase}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: ec-number=ec-1.14.19.47}}
−
* [[RXN0-949]]
+
{{#set: nb gene associated=1}}
−
** Category: [[annotation]]
+
{{#set: nb pathway associated=2}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: reconstruction category=annotation}}
−
</div>
+
{{#set: reconstruction tool=pathwaytools}}
−
== Pathway(s) associated ==
+
{{#set: reconstruction comment=n.a}}
−
* [[PWY-7382]]
+
{{#set: reconstruction source=saccharina_japonica_genome}}
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY0-522]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6984]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1275]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-501]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6987]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=12820}}
 
−
{{#set: left-end-position=7673}}
 
−
{{#set: centisome-position=7.1205845    }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=7}}
 
−
{{#set: nb pathway associated=6}}
 

Revision as of 14:24, 26 August 2019

Reaction RXN-11680

  • direction:
    • left-to-right
  • common-name:
    • linoleoyl-lipid 6-desaturase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6603, dicranin biosynthesis: PWY-6603
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5353, arachidonate biosynthesis I (6-desaturase, lower eukaryotes): PWY-5353
    • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=PREGNENOLONE&oldid=21205"