Difference between revisions of "PREGNENOLONE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11680 RXN-11680] == * direction: ** left-to-right * common-name: ** linoleoyl-lipid 6-desaturas...")
(Created page with "Category:gene == Gene SJ02273 == * transcription-direction: ** positive * right-end-position: ** 538614 * left-end-position: ** 517631 * centisome-position: ** 95.290085...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11680 RXN-11680] ==
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== Gene SJ02273 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* common-name:
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* right-end-position:
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** linoleoyl-lipid 6-desaturase
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** 538614
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* ec-number:
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* left-end-position:
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** [http://enzyme.expasy.org/EC/1.14.19.47 ec-1.14.19.47]
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** 517631
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== Reaction formula ==
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* centisome-position:
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* 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[Linoleoyl-groups]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[Gamma-linolenoyl-groups]][c] '''+''' 2 [[WATER]][c]
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** 95.290085   
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[SJ05483]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[RXN-15561]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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* [[PWY-6603]], dicranin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6603 PWY-6603]
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** Category: [[annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
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== Pathway(s) associated ==
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7511]]
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== Reconstruction information  ==
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: transcription-direction=positive}}
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== External links  ==
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{{#set: right-end-position=538614}}
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* RHEA:
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{{#set: left-end-position=517631}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46285 46285]
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{{#set: centisome-position=95.290085    }}
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* LIGAND-RXN:
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07063 R07063]
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{{#set: nb reaction associated=2}}
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{{#set: direction=left-to-right}}
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{{#set: nb pathway associated=1}}
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{{#set: common-name=linoleoyl-lipid 6-desaturase}}
 
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{{#set: ec-number=ec-1.14.19.47}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 09:28, 27 August 2019

Gene SJ02273

  • transcription-direction:
    • positive
  • right-end-position:
    • 538614
  • left-end-position:
    • 517631
  • centisome-position:
    • 95.290085

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




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