Difference between revisions of "PREPHENATE-TRANSAMINE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] == * direction: ** left-to-right * common-name...")
(Created page with "Category:reaction == Reaction 7KAPSYN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.47 ec-2.3.1.47] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] ==
+
== Reaction 7KAPSYN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** tyrosine-trna ligase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.1 ec-6.1.1.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.47 ec-2.3.1.47]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[TYR]][c] '''+''' 1 [[TYR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-TYR-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CPD-558]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18555]]
+
* Gene: [[SJ00855]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ02072]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02063]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY-6578]], 8-amino-7-oxononanoate biosynthesis III:
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10221 10221]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20712 20712]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02918 R02918]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03210 R03210]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P28669 P28669]
+
** [http://www.uniprot.org/uniprot/Q58694 Q58694]
−
** [http://www.uniprot.org/uniprot/P22326 P22326]
+
** [http://www.uniprot.org/uniprot/O84782 O84782]
−
** [http://www.uniprot.org/uniprot/P36421 P36421]
+
** [http://www.uniprot.org/uniprot/Q9Z6Y3 Q9Z6Y3]
−
** [http://www.uniprot.org/uniprot/P41256 P41256]
+
** [http://www.uniprot.org/uniprot/P0A4X4 P0A4X4]
−
** [http://www.uniprot.org/uniprot/O51343 O51343]
+
** [http://www.uniprot.org/uniprot/Q9K0U0 Q9K0U0]
−
** [http://www.uniprot.org/uniprot/Q9PN27 Q9PN27]
+
** [http://www.uniprot.org/uniprot/Q9PLE6 Q9PLE6]
−
** [http://www.uniprot.org/uniprot/Q9CIH5 Q9CIH5]
+
** [http://www.uniprot.org/uniprot/P44422 P44422]
−
** [http://www.uniprot.org/uniprot/Q9ZL69 Q9ZL69]
+
** [http://www.uniprot.org/uniprot/O25320 O25320]
−
** [http://www.uniprot.org/uniprot/P47693 P47693]
+
** [http://www.uniprot.org/uniprot/P53556 P53556]
−
** [http://www.uniprot.org/uniprot/Q9ZCZ4 Q9ZCZ4]
+
** [http://www.uniprot.org/uniprot/Q9PIJ3 Q9PIJ3]
−
** [http://www.uniprot.org/uniprot/P43836 P43836]
+
** [http://www.uniprot.org/uniprot/O66875 O66875]
−
** [http://www.uniprot.org/uniprot/O83806 O83806]
+
** [http://www.uniprot.org/uniprot/Q9ZLN3 Q9ZLN3]
−
** [http://www.uniprot.org/uniprot/Q57834 Q57834]
+
** [http://www.uniprot.org/uniprot/Q9Z6L6 Q9Z6L6]
−
** [http://www.uniprot.org/uniprot/P56417 P56417]
+
** [http://www.uniprot.org/uniprot/Q9JT28 Q9JT28]
−
** [http://www.uniprot.org/uniprot/O67632 O67632]
+
** [http://www.uniprot.org/uniprot/P22806 P22806]
−
** [http://www.uniprot.org/uniprot/O58739 O58739]
+
** [http://www.uniprot.org/uniprot/P45487 P45487]
−
** [http://www.uniprot.org/uniprot/Q9WYU8 Q9WYU8]
+
** [http://www.uniprot.org/uniprot/P74770 P74770]
−
** [http://www.uniprot.org/uniprot/O27795 O27795]
+
** [http://www.uniprot.org/uniprot/P12998 P12998]
−
** [http://www.uniprot.org/uniprot/O84065 O84065]
 
−
** [http://www.uniprot.org/uniprot/Q9JVY6 Q9JVY6]
 
−
** [http://www.uniprot.org/uniprot/P48527 P48527]
 
−
** [http://www.uniprot.org/uniprot/Q49900 Q49900]
 
−
** [http://www.uniprot.org/uniprot/P75122 P75122]
 
−
** [http://www.uniprot.org/uniprot/P73141 P73141]
 
−
** [http://www.uniprot.org/uniprot/P73144 P73144]
 
−
** [http://www.uniprot.org/uniprot/P95982 P95982]
 
−
** [http://www.uniprot.org/uniprot/P00952 P00952]
 
−
** [http://www.uniprot.org/uniprot/P04077 P04077]
 
−
** [http://www.uniprot.org/uniprot/P0AGJ9 P0AGJ9]
 
−
** [http://www.uniprot.org/uniprot/P12063 P12063]
 
−
** [http://www.uniprot.org/uniprot/P93363 P93363]
 
−
** [http://www.uniprot.org/uniprot/O14055 O14055]
 
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tyrosine-trna ligase}}
+
{{#set: ec-number=ec-2.3.1.47}}
−
{{#set: ec-number=ec-6.1.1.1}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:40, 18 December 2020

Reaction 7KAPSYN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6578, 8-amino-7-oxononanoate biosynthesis III:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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