Difference between revisions of "PREPHENATEDEHYDROG-RXN"

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(Created page with "Category:reaction == Reaction CHORISMATEMUT-RXN == * direction: ** reversible * common-name: ** chorismate mutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.99.5 ec-...")
(Created page with "Category:reaction == Reaction 1.5.1.15-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.5.1.15 ec-1.5.1.15] == Reaction formula == * 1 [...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CHORISMATEMUT-RXN ==
+
== Reaction 1.5.1.15-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** chorismate mutase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.99.5 ec-5.4.99.5]
+
** [http://enzyme.expasy.org/EC/1.5.1.15 ec-1.5.1.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c]
+
* 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00045]]
+
* Gene: [[SJ02922]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07700]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3461]], L-tyrosine biosynthesis II:
+
* [[PWY-2201]], folate transformations I:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6120]], L-tyrosine biosynthesis III:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PHESYN]], L-phenylalanine biosynthesis I:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7626]], bacilysin biosynthesis:
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-3462]], L-phenylalanine biosynthesis II:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[TYRSYN]], L-tyrosine biosynthesis I:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6627]], salinosporamide A biosynthesis:
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13900 13900]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22893 22893]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01218 R01218]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P19080 P19080]
+
** [http://www.uniprot.org/uniprot/P18155 P18155]
−
** [http://www.uniprot.org/uniprot/P27603 P27603]
+
** [http://www.uniprot.org/uniprot/P13995 P13995]
−
** [http://www.uniprot.org/uniprot/P32178 P32178]
+
** [http://www.uniprot.org/uniprot/Q02046 Q02046]
−
** [http://www.uniprot.org/uniprot/P43900 P43900]
+
** [http://www.uniprot.org/uniprot/Q04448 Q04448]
−
** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7]
+
** [http://www.uniprot.org/uniprot/Q48977 Q48977]
−
** [http://www.uniprot.org/uniprot/P21204 P21204]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q58029 Q58029]
+
{{#set: ec-number=ec-1.5.1.15}}
−
** [http://www.uniprot.org/uniprot/Q57696 Q57696]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P43902 P43902]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P07023 P07023]
 
−
** [http://www.uniprot.org/uniprot/Q02286 Q02286]
 
−
** [http://www.uniprot.org/uniprot/Q02287 Q02287]
 
−
** [http://www.uniprot.org/uniprot/P42738 P42738]
 
−
** [http://www.uniprot.org/uniprot/O22409 O22409]
 
−
** [http://www.uniprot.org/uniprot/O22410 O22410]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=chorismate mutase}}
 
−
{{#set: ec-number=ec-5.4.99.5}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=7}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:32, 5 January 2021

Reaction 1.5.1.15-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2201, folate transformations I:
    • 9 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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