Difference between revisions of "PRIBFAICARPISOM-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ESTRADIOL-17-BETA-DEHYDROGENASE-RXN ESTRADIOL-17-BETA-DEHYDROGENASE-RXN] == * direction: ** left-to...")
(Created page with "Category:reaction == Reaction PRIBFAICARPISOM-RXN == * direction: ** left-to-right * common-name: ** n-(5'-phospho-l-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imi...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ESTRADIOL-17-BETA-DEHYDROGENASE-RXN ESTRADIOL-17-BETA-DEHYDROGENASE-RXN] ==
+
== Reaction PRIBFAICARPISOM-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** estradiol-17β dehydrogenase / estrone reductase
+
** n-(5'-phospho-l-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase
−
** estradiol 17-beta-dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.62 ec-1.1.1.62]
+
** [http://enzyme.expasy.org/EC/5.3.1.16 ec-5.3.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ESTRONE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-352]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
* 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c] '''=>''' 1 [[PHOSPHORIBULOSYL-FORMIMINO-AICAR-P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ12953]]
−
* Gene: [[SJ21322]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ06969]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21312]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
+
* Gene: [[SJ19186]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
** Category: [[orthology]]
−
* Gene: [[SJ01444]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ05275]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10028]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20291]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ05276]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ05277]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-380]], estradiol biosynthesis I (via estrone): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-380 PWY66-380]
+
* [[HISTSYN-PWY]], L-histidine biosynthesis:
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR103169
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24618 24618]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15470 15470]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24615 24615]
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04640 R04640]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P37059 P37059]
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** [http://www.uniprot.org/uniprot/Q02131 Q02131]
−
** [http://www.uniprot.org/uniprot/P70694 P70694]
+
** [http://www.uniprot.org/uniprot/Q9JVH4 Q9JVH4]
−
** [http://www.uniprot.org/uniprot/P14061 P14061]
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** [http://www.uniprot.org/uniprot/Q9PM74 Q9PM74]
−
** [http://www.uniprot.org/uniprot/P37058 P37058]
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** [http://www.uniprot.org/uniprot/P44435 P44435]
−
** [http://www.uniprot.org/uniprot/P51657 P51657]
+
** [http://www.uniprot.org/uniprot/P10372 P10372]
−
** [http://www.uniprot.org/uniprot/P51659 P51659]
+
** [http://www.uniprot.org/uniprot/P10371 P10371]
−
** [http://www.uniprot.org/uniprot/P51656 P51656]
+
** [http://www.uniprot.org/uniprot/P16250 P16250]
 +
** [http://www.uniprot.org/uniprot/P05324 P05324]
 +
** [http://www.uniprot.org/uniprot/P26720 P26720]
 +
** [http://www.uniprot.org/uniprot/P50936 P50936]
 +
** [http://www.uniprot.org/uniprot/P74561 P74561]
 +
** [http://www.uniprot.org/uniprot/O82782 O82782]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=estradiol 17-beta-dehydrogenase|estradiol-17&beta; dehydrogenase / estrone reductase}}
+
{{#set: common-name=n-(5'-phospho-l-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase}}
−
{{#set: ec-number=ec-1.1.1.62}}
+
{{#set: ec-number=ec-5.3.1.16}}
−
{{#set: nb gene associated=9}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction PRIBFAICARPISOM-RXN

  • direction:
    • left-to-right
  • common-name:
    • n-(5'-phospho-l-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISTSYN-PWY, L-histidine biosynthesis:
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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