Difference between revisions of "PRO"

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(Created page with "Category:gene == Gene SJ18507 == * transcription-direction: ** positive * right-end-position: ** 124013 * left-end-position: ** 112781 * centisome-position: ** 46.342514...")
 
(Created page with "Category:gene == Gene SJ14150 == * transcription-direction: ** positive * right-end-position: ** 239295 * left-end-position: ** 216979 * centisome-position: ** 30.20061...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18507 ==
+
== Gene SJ14150 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 124013
+
** 239295
 
* left-end-position:
 
* left-end-position:
−
** 112781
+
** 216979
 
* centisome-position:
 
* centisome-position:
−
** 46.342514    
+
** 30.20061    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[MALSYN-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11135]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[P105-PWY]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6969]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''10''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[GLYOXYLATE-BYPASS]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7294]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7295]]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7854]]
 +
** '''1''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7118]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLYOXDEG-PWY]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=124013}}
+
{{#set: right-end-position=239295}}
−
{{#set: left-end-position=112781}}
+
{{#set: left-end-position=216979}}
−
{{#set: centisome-position=46.342514   }}
+
{{#set: centisome-position=30.20061   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=8}}

Revision as of 14:23, 26 August 2019

Gene SJ14150

  • transcription-direction:
    • positive
  • right-end-position:
    • 239295
  • left-end-position:
    • 216979
  • centisome-position:
    • 30.20061

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P105-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-6969
    • 10 reactions found over 12 reactions in the full pathway
  • GLYOXYLATE-BYPASS
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7294
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7295
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7854
    • 1 reactions found over 14 reactions in the full pathway
  • PWY-7118
    • 5 reactions found over 6 reactions in the full pathway
  • GLYOXDEG-PWY
    • 2 reactions found over 2 reactions in the full pathway




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