Difference between revisions of "PROLINE--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction GLUTATHIONE-SYN-RXN == * direction: ** left-to-right * common-name: ** glutathione synthetase * ec-number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:reaction == Reaction RXN-8975 == * direction: ** reversible * common-name: ** phospho-n-acetylmuramoyl-pentapeptide-transferase * ec-number: ** [http://enzyme.exp...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTATHIONE-SYN-RXN ==
+
== Reaction RXN-8975 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** glutathione synthetase
+
** phospho-n-acetylmuramoyl-pentapeptide-transferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.2.3 ec-6.3.2.3]
+
** [http://enzyme.expasy.org/EC/2.7.8.13 ec-2.7.8.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[L-GAMMA-GLUTAMYLCYSTEINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[C3]][c] '''+''' 1 [[CPD-9646]][c] '''<=>''' 1 [[C4]][c] '''+''' 1 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10036]]
+
* Gene: [[SJ02910]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUTATHIONESYN-PWY]], glutathione biosynthesis:
+
* [[PWY-6471]], peptidoglycan biosynthesis IV (Enterococcus faecium):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5265]], peptidoglycan biosynthesis II (staphylococci):
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR109724
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13558 13558]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21923 21923]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00497 R00497]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05629 R05629]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9JTJ6 Q9JTJ6]
+
{{#set: common-name=phospho-n-acetylmuramoyl-pentapeptide-transferase}}
−
** [http://www.uniprot.org/uniprot/P46413 P46413]
+
{{#set: ec-number=ec-2.7.8.13}}
−
** [http://www.uniprot.org/uniprot/P45480 P45480]
 
−
** [http://www.uniprot.org/uniprot/P35667 P35667]
 
−
** [http://www.uniprot.org/uniprot/P35669 P35669]
 
−
** [http://www.uniprot.org/uniprot/P35668 P35668]
 
−
** [http://www.uniprot.org/uniprot/P48637 P48637]
 
−
** [http://www.uniprot.org/uniprot/P46416 P46416]
 
−
** [http://www.uniprot.org/uniprot/P51855 P51855]
 
−
** [http://www.uniprot.org/uniprot/P73493 P73493]
 
−
** [http://www.uniprot.org/uniprot/P04425 P04425]
 
−
** [http://www.uniprot.org/uniprot/O22494 O22494]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=glutathione synthetase}}
 
−
{{#set: ec-number=ec-6.3.2.3}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:34, 15 March 2021

Reaction RXN-8975

  • direction:
    • reversible
  • common-name:
    • phospho-n-acetylmuramoyl-pentapeptide-transferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6471, peptidoglycan biosynthesis IV (Enterococcus faecium):
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5265, peptidoglycan biosynthesis II (staphylococci):
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR109724
  • RHEA:
  • LIGAND-RXN:





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