Difference between revisions of "PROPANOL"

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(Created page with "Category:gene == Gene SJ07149 == * transcription-direction: ** positive * right-end-position: ** 60951 * left-end-position: ** 33852 * centisome-position: ** 48.443737...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9679 RXN-9679] == * direction: ** left-to-right * common-name: ** sarcosine n-methyltransferase...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ07149 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9679 RXN-9679] ==
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* transcription-direction:
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* direction:
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** positive
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** left-to-right
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* right-end-position:
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* common-name:
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** 60951
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** sarcosine n-methyltransferase
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* left-end-position:
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** sarcosine-dimethylglycine methyltransferase
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** 33852
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* synonymous:
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* centisome-position:
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** apdmt
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** 48.443737   
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** s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase
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== Organism(s) associated with this gene  ==
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** sarcosine dimethylglycine n-methyltransferase
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* [[S.japonica_carotenoid_curated]]
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** glycine-sarcosine methyltransferase
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== Reaction(s) associated ==
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** gsmt
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* [[3.4.25.1-RXN]]
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** glycine sarcosine n-methyltransferase
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** glycine sarcosine dimethylglycine n-methyltransferase
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** gmt
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** s-adenosyl-l-methionine:sarcosine n-methyltransferase
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** sdmt
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** apgsmt
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** gsdmt
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== Reaction formula ==
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* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[SARCOSINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIMETHYL-GLYCINE]][c] '''+''' 1 [[PROTON]][c]
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== Gene(s) associated with this reaction  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ11087]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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* Gene: [[SJ12128]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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** Category: [[annotation]]
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{{#set: transcription-direction=positive}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: right-end-position=60951}}
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* Gene: [[SJ02540]]
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{{#set: left-end-position=33852}}
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** Category: [[annotation]]
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{{#set: centisome-position=48.443737    }}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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* Gene: [[SJ02539]]
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{{#set: nb reaction associated=1}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12119]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ10116]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12116]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ03081]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ18177]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ12118]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ14716]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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</div>
 +
== Pathway(s)  ==
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* [[P541-PWY]], glycine betaine biosynthesis IV (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=P541-PWY P541-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6004]], glycine betaine biosynthesis V (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6004 PWY-6004]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15454 15454]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07243 R07243]
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{{#set: direction=left-to-right}}
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{{#set: common-name=sarcosine n-methyltransferase|sarcosine-dimethylglycine methyltransferase}}
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{{#set: synonymous=glycine-sarcosine methyltransferase|s-adenosyl-l-methionine:sarcosine n-methyltransferase|glycine sarcosine dimethylglycine n-methyltransferase|apgsmt|gmt|glycine sarcosine n-methyltransferase|sarcosine dimethylglycine n-methyltransferase|gsmt|gsdmt|apdmt|sdmt|s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase}}
 +
{{#set: nb gene associated=11}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:24, 26 August 2019

Reaction RXN-9679

  • direction:
    • left-to-right
  • common-name:
    • sarcosine n-methyltransferase
    • sarcosine-dimethylglycine methyltransferase
  • synonymous:
    • apdmt
    • s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase
    • sarcosine dimethylglycine n-methyltransferase
    • glycine-sarcosine methyltransferase
    • gsmt
    • glycine sarcosine n-methyltransferase
    • glycine sarcosine dimethylglycine n-methyltransferase
    • gmt
    • s-adenosyl-l-methionine:sarcosine n-methyltransferase
    • sdmt
    • apgsmt
    • gsdmt

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P541-PWY, glycine betaine biosynthesis IV (from glycine): P541-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6004, glycine betaine biosynthesis V (from glycine): PWY-6004
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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