Difference between revisions of "PROPIONYL-COA-CARBOXY-RXN"

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(Created page with "Category:reaction == Reaction RXN-8321 == * direction: ** left-to-right * common-name: ** 1-18:2-2-18:1-phosphatidylcholine desaturase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction PROPIONYL-COA-CARBOXY-RXN == * direction: ** reversible * common-name: ** propionyl-coa carboxylase * ec-number: ** [http://enzyme.expasy.org...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8321 ==
+
== Reaction PROPIONYL-COA-CARBOXY-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 1-18:2-2-18:1-phosphatidylcholine desaturase
+
** propionyl-coa carboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.19.25 ec-1.14.19.25]
+
** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-8088]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-8089]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09228]]
+
* Gene: [[SJ12870]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ03069]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08104]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-762]], phospholipid desaturation:
+
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
−
** '''19''' reactions found over '''21''' reactions in the full pathway
+
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PROPIONMET-PWY]], propanoyl CoA degradation I:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6728]], methylaspartate cycle:
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* METANETX-RXN : MNXR103100
−
{{#set: common-name=1-18:2-2-18:1-phosphatidylcholine desaturase}}
+
* RHEA:
−
{{#set: ec-number=ec-1.14.19.25}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23723 23723]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0]
 +
** [http://www.uniprot.org/uniprot/P07633 P07633]
 +
** [http://www.uniprot.org/uniprot/P05165 P05165]
 +
** [http://www.uniprot.org/uniprot/Q06101 Q06101]
 +
** [http://www.uniprot.org/uniprot/Q20676 Q20676]
 +
** [http://www.uniprot.org/uniprot/O24789 O24789]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=propionyl-coa carboxylase}}
 +
{{#set: ec-number=ec-6.4.1.3}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction PROPIONYL-COA-CARBOXY-RXN

  • direction:
    • reversible
  • common-name:
    • propionyl-coa carboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle:
    • 5 reactions found over 13 reactions in the full pathway
  • PROPIONMET-PWY, propanoyl CoA degradation I:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6728, methylaspartate cycle:
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial):
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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