Difference between revisions of "PROSTAGLANDIN-E-SYNTHASE-RXN"

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(Created page with "Category:reaction == Reaction 3.6.3.6-RXN == * direction: ** left-to-right * common-name: ** hydrogen-exporting atpase activity, phosphorylative mechanism * ec-number: **...")
(Created page with "Category:reaction == Reaction RXN-9530 == * direction: ** left-to-right * common-name: ** trans-δ2-decenoyl-[acp]reductase (nadph, b-specific) ** fatty acid synthase...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.6.3.6-RXN ==
+
== Reaction RXN-9530 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** hydrogen-exporting atpase activity, phosphorylative mechanism
+
** trans-δ2-decenoyl-[acp]reductase (nadph, b-specific)
 +
** fatty acid synthase
 +
** decanoyl-[acp] reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.3.6 ec-3.6.3.6]
+
** [http://enzyme.expasy.org/EC/1.3.1.10 ec-1.3.1.10]
 +
** [http://enzyme.expasy.org/EC/1.3.1.39 ec-1.3.1.39]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 2 [[PROTON]][e] '''+''' 1 [[Pi]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Trans-D2-decenoyl-ACPs]][c] '''=>''' 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00836]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ15983]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00613]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13014]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11672]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03883]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04769]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10624]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06944]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19629]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06617]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00320]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17743]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04443]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ16239]]
+
* Gene: [[SJ18059]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ13724]]
+
</div>
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5994]], palmitate biosynthesis (animals and fungi, cytoplasm):
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20853 20853]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9M460 Q9M460]
 
−
** [http://www.uniprot.org/uniprot/P21282 P21282]
 
−
** [http://www.uniprot.org/uniprot/P11593 P11593]
 
−
** [http://www.uniprot.org/uniprot/P11019 P11019]
 
−
** [http://www.uniprot.org/uniprot/P11574 P11574]
 
−
** [http://www.uniprot.org/uniprot/P23968 P23968]
 
−
** [http://www.uniprot.org/uniprot/P27449 P27449]
 
−
** [http://www.uniprot.org/uniprot/P23957 P23957]
 
−
** [http://www.uniprot.org/uniprot/P32842 P32842]
 
−
** [http://www.uniprot.org/uniprot/Q08435 Q08435]
 
−
** [http://www.uniprot.org/uniprot/P32563 P32563]
 
−
** [http://www.uniprot.org/uniprot/Q42932 Q42932]
 
−
** [http://www.uniprot.org/uniprot/P22180 P22180]
 
−
** [http://www.uniprot.org/uniprot/P38078 P38078]
 
−
** [http://www.uniprot.org/uniprot/P38607 P38607]
 
−
** [http://www.uniprot.org/uniprot/P41807 P41807]
 
−
** [http://www.uniprot.org/uniprot/P31478 P31478]
 
−
** [http://www.uniprot.org/uniprot/Q7M196 Q7M196]
 
−
** [http://www.uniprot.org/uniprot/P40975 P40975]
 
−
** [http://www.uniprot.org/uniprot/P39111 P39111]
 
−
** [http://www.uniprot.org/uniprot/P55277 P55277]
 
−
** [http://www.uniprot.org/uniprot/Q58623 Q58623]
 
−
** [http://www.uniprot.org/uniprot/P16140 P16140]
 
−
** [http://www.uniprot.org/uniprot/P21281 P21281]
 
−
** [http://www.uniprot.org/uniprot/Q9SPD5 Q9SPD5]
 
−
** [http://www.uniprot.org/uniprot/Q7M195 Q7M195]
 
−
** [http://www.uniprot.org/uniprot/Q7M290 Q7M290]
 
−
** [http://www.uniprot.org/uniprot/Q24583 Q24583]
 
−
** [http://www.uniprot.org/uniprot/P63082 P63082]
 
−
** [http://www.uniprot.org/uniprot/P31403 P31403]
 
−
** [http://www.uniprot.org/uniprot/P21283 P21283]
 
−
** [http://www.uniprot.org/uniprot/P63081 P63081]
 
−
** [http://www.uniprot.org/uniprot/P23956 P23956]
 
−
** [http://www.uniprot.org/uniprot/P05030 P05030]
 
−
** [http://www.uniprot.org/uniprot/P19657 P19657]
 
−
** [http://www.uniprot.org/uniprot/P25515 P25515]
 
−
** [http://www.uniprot.org/uniprot/P17255 P17255]
 
−
** [http://www.uniprot.org/uniprot/P28877 P28877]
 
−
** [http://www.uniprot.org/uniprot/P24545 P24545]
 
−
** [http://www.uniprot.org/uniprot/P20649 P20649]
 
−
** [http://www.uniprot.org/uniprot/P19456 P19456]
 
−
** [http://www.uniprot.org/uniprot/P20431 P20431]
 
−
** [http://www.uniprot.org/uniprot/P07038 P07038]
 
−
** [http://www.uniprot.org/uniprot/P11592 P11592]
 
−
** [http://www.uniprot.org/uniprot/P09469 P09469]
 
−
** [http://www.uniprot.org/uniprot/P09627 P09627]
 
−
** [http://www.uniprot.org/uniprot/P28876 P28876]
 
−
** [http://www.uniprot.org/uniprot/Q03105 Q03105]
 
−
** [http://www.uniprot.org/uniprot/P22550 P22550]
 
−
** [http://www.uniprot.org/uniprot/P31410 P31410]
 
−
** [http://www.uniprot.org/uniprot/P31404 P31404]
 
−
** [http://www.uniprot.org/uniprot/P31400 P31400]
 
−
** [http://www.uniprot.org/uniprot/Q04236 Q04236]
 
−
** [http://www.uniprot.org/uniprot/Q04238 Q04238]
 
−
** [http://www.uniprot.org/uniprot/Q04239 Q04239]
 
−
** [http://www.uniprot.org/uniprot/Q04237 Q04237]
 
−
** [http://www.uniprot.org/uniprot/P31401 P31401]
 
−
** [http://www.uniprot.org/uniprot/P31409 P31409]
 
−
** [http://www.uniprot.org/uniprot/P31406 P31406]
 
−
** [http://www.uniprot.org/uniprot/P32610 P32610]
 
−
** [http://www.uniprot.org/uniprot/P32903 P32903]
 
−
** [http://www.uniprot.org/uniprot/Q26250 Q26250]
 
−
** [http://www.uniprot.org/uniprot/P31408 P31408]
 
−
** [http://www.uniprot.org/uniprot/P50515 P50515]
 
−
** [http://www.uniprot.org/uniprot/Q03194 Q03194]
 
−
** [http://www.uniprot.org/uniprot/P54211 P54211]
 
−
** [http://www.uniprot.org/uniprot/Q26975 Q26975]
 
−
** [http://www.uniprot.org/uniprot/Q26976 Q26976]
 
−
** [http://www.uniprot.org/uniprot/P31412 P31412]
 
−
** [http://www.uniprot.org/uniprot/P34546 P34546]
 
−
** [http://www.uniprot.org/uniprot/P23380 P23380]
 
−
** [http://www.uniprot.org/uniprot/P31413 P31413]
 
−
** [http://www.uniprot.org/uniprot/Q43182 Q43182]
 
−
** [http://www.uniprot.org/uniprot/Q43178 Q43178]
 
−
** [http://www.uniprot.org/uniprot/Q43106 Q43106]
 
−
** [http://www.uniprot.org/uniprot/Q43271 Q43271]
 
−
** [http://www.uniprot.org/uniprot/P37296 P37296]
 
−
** [http://www.uniprot.org/uniprot/P32366 P32366]
 
−
** [http://www.uniprot.org/uniprot/Q39291 Q39291]
 
−
** [http://www.uniprot.org/uniprot/P59227 P59227]
 
−
** [http://www.uniprot.org/uniprot/P59229 P59229]
 
−
** [http://www.uniprot.org/uniprot/P59228 P59228]
 
−
** [http://www.uniprot.org/uniprot/P22203 P22203]
 
−
** [http://www.uniprot.org/uniprot/P49087 P49087]
 
−
** [http://www.uniprot.org/uniprot/Q41773 Q41773]
 
−
** [http://www.uniprot.org/uniprot/P48836 P48836]
 
−
** [http://www.uniprot.org/uniprot/P37367 P37367]
 
−
** [http://www.uniprot.org/uniprot/Q9ZQX4 Q9ZQX4]
 
−
** [http://www.uniprot.org/uniprot/Q39258 Q39258]
 
−
** [http://www.uniprot.org/uniprot/Q43243 Q43243]
 
−
** [http://www.uniprot.org/uniprot/Q40002 Q40002]
 
−
** [http://www.uniprot.org/uniprot/O82629 O82629]
 
−
** [http://www.uniprot.org/uniprot/O48614 O48614]
 
−
** [http://www.uniprot.org/uniprot/P93597 P93597]
 
−
** [http://www.uniprot.org/uniprot/Q9SU58 Q9SU58]
 
−
** [http://www.uniprot.org/uniprot/Q9SZY7 Q9SZY7]
 
−
** [http://www.uniprot.org/uniprot/Q41396 Q41396]
 
−
** [http://www.uniprot.org/uniprot/O23948 O23948]
 
−
** [http://www.uniprot.org/uniprot/Q43131 Q43131]
 
−
** [http://www.uniprot.org/uniprot/Q41648 Q41648]
 
−
** [http://www.uniprot.org/uniprot/P93265 P93265]
 
−
** [http://www.uniprot.org/uniprot/Q40272 Q40272]
 
−
** [http://www.uniprot.org/uniprot/P48414 P48414]
 
−
** [http://www.uniprot.org/uniprot/O04956 O04956]
 
−
** [http://www.uniprot.org/uniprot/P48413 P48413]
 
−
** [http://www.uniprot.org/uniprot/O61112 O61112]
 
−
** [http://www.uniprot.org/uniprot/O94072 O94072]
 
−
** [http://www.uniprot.org/uniprot/Q17660 Q17660]
 
−
** [http://www.uniprot.org/uniprot/Q21898 Q21898]
 
−
** [http://www.uniprot.org/uniprot/Q22087 Q22087]
 
−
** [http://www.uniprot.org/uniprot/Q9XXU9 Q9XXU9]
 
−
** [http://www.uniprot.org/uniprot/P53659 P53659]
 
−
** [http://www.uniprot.org/uniprot/O82628 O82628]
 
−
** [http://www.uniprot.org/uniprot/Q9SDS7 Q9SDS7]
 
−
** [http://www.uniprot.org/uniprot/Q9M4N3 Q9M4N3]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hydrogen-exporting atpase activity, phosphorylative mechanism}}
+
{{#set: common-name=decanoyl-[acp] reductase|trans-&delta;2-decenoyl-[acp]reductase (nadph, b-specific)|fatty acid synthase}}
−
{{#set: ec-number=ec-3.6.3.6}}
+
{{#set: ec-number=ec-1.3.1.39|ec-2.3.1.85|ec-2.3.1.86|ec-1.3.1.10}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=15}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:20, 14 January 2021

Reaction RXN-9530

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5994, palmitate biosynthesis (animals and fungi, cytoplasm):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "decanoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "trans-δ2-decenoyl-[acp]reductase (nadph, b-specific)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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