Difference between revisions of "PROTEIN-ARGININE-DEIMINASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRIBFAICARPISOM-RXN PRIBFAICARPISOM-RXN] == * direction: ** left-to-right * common-name: ** n-(5'-p...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALDOSE-1-EPIMERASE-RXN ALDOSE-1-EPIMERASE-RXN] == * direction: ** reversible * common-name: ** aldo...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRIBFAICARPISOM-RXN PRIBFAICARPISOM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALDOSE-1-EPIMERASE-RXN ALDOSE-1-EPIMERASE-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** n-(5'-phospho-l-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase
+
** aldose 1-epimerase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.1.16 ec-5.3.1.16]
+
** [http://enzyme.expasy.org/EC/5.1.3.3 ec-5.1.3.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c] '''=>''' 1 [[PHOSPHORIBULOSYL-FORMIMINO-AICAR-P]][c]
+
* 1 [[ALPHA-GLUCOSE]][c] '''<=>''' 1 [[GLC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12953]]
+
* Gene: [[SJ17177]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ19186]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
* [[PWY0-1466]], trehalose degradation VI (periplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1466 PWY0-1466]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15470 15470]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10264 10264]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04640 R04640]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01602 R01602]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q02131 Q02131]
+
** [http://www.uniprot.org/uniprot/P05149 P05149]
−
** [http://www.uniprot.org/uniprot/Q9JVH4 Q9JVH4]
+
** [http://www.uniprot.org/uniprot/Q8X8E4 Q8X8E4]
−
** [http://www.uniprot.org/uniprot/Q9PM74 Q9PM74]
+
** [http://www.uniprot.org/uniprot/P21955 P21955]
−
** [http://www.uniprot.org/uniprot/P44435 P44435]
+
** [http://www.uniprot.org/uniprot/P31765 P31765]
−
** [http://www.uniprot.org/uniprot/P10372 P10372]
+
** [http://www.uniprot.org/uniprot/Q9CFG9 Q9CFG9]
−
** [http://www.uniprot.org/uniprot/P10371 P10371]
+
** [http://www.uniprot.org/uniprot/P0A9C3 P0A9C3]
−
** [http://www.uniprot.org/uniprot/P16250 P16250]
+
** [http://www.uniprot.org/uniprot/Q9JSW7 Q9JSW7]
−
** [http://www.uniprot.org/uniprot/P05324 P05324]
+
** [http://www.uniprot.org/uniprot/Q9WYB8 Q9WYB8]
−
** [http://www.uniprot.org/uniprot/P26720 P26720]
+
** [http://www.uniprot.org/uniprot/Q9CE62 Q9CE62]
−
** [http://www.uniprot.org/uniprot/P50936 P50936]
+
** [http://www.uniprot.org/uniprot/Q7M2P6 Q7M2P6]
−
** [http://www.uniprot.org/uniprot/P74561 P74561]
+
** [http://www.uniprot.org/uniprot/O48971 O48971]
−
** [http://www.uniprot.org/uniprot/O82782 O82782]
+
{{#set: direction=reversible}}
−
{{#set: direction=left-to-right}}
+
{{#set: common-name=aldose 1-epimerase}}
−
{{#set: common-name=n-(5'-phospho-l-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase}}
+
{{#set: ec-number=ec-5.1.3.3}}
−
{{#set: ec-number=ec-5.3.1.16}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:28, 26 August 2019

Reaction ALDOSE-1-EPIMERASE-RXN

  • direction:
    • reversible
  • common-name:
    • aldose 1-epimerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1466, trehalose degradation VI (periplasmic): PWY0-1466
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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