Difference between revisions of "PROTOHEME"

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(Created page with "Category:gene == Gene SJ02214 == * transcription-direction: ** positive * right-end-position: ** 96011 * left-end-position: ** 55580 * centisome-position: ** 39.7017 =...")
 
(Created page with "Category:metabolite == Metabolite PROTOHEME == * common-name: ** ferroheme b * smiles: ** c=cc1(c(c)=c7(c=c8(c(c)=c(ccc(=o)[o-])c6(=[n+]([fe--]24(n(c=1c=c3(c(c)=c(c=c)c(=[...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ02214 ==
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== Metabolite PROTOHEME ==
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* transcription-direction:
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* common-name:
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** positive
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** ferroheme b
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* right-end-position:
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* smiles:
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** 96011
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** c=cc1(c(c)=c7(c=c8(c(c)=c(ccc(=o)[o-])c6(=[n+]([fe--]24(n(c=1c=c3(c(c)=c(c=c)c(=[n+]23)c=c5(c(c)=c(ccc(=o)[o-])c(n45)=c6)))7))8))))
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* left-end-position:
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* inchi-key:
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** 55580
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** kabfmibpwcxcrk-rggahwmasa-j
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* centisome-position:
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* molecular-weight:
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** 39.7017   
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** 614.482
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[HEME-OXYGENASE-DECYCLIZING-RXN]]
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== Reaction(s) associated ==
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* [[HEMEOSYN-RXN]]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* [[PROTOHEMEFERROCHELAT-RXN]]
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** Category: [[orthology]]
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* [[RXN-17523]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Reaction(s) known to produce the compound ==
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* [[BIOTIN-CARBOXYL-RXN]]
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* [[PROTOHEMEFERROCHELAT-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=ferroheme b}}
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* [[DALADALALIG-RXN]]
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{{#set: inchi-key=inchikey=kabfmibpwcxcrk-rggahwmasa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=614.482}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY-7388]]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6679]]
 
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** '''1''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-5744]]
 
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** '''4''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-5743]]
 
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** '''5''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-5789]]
 
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** '''8''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY0-1264]]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7953]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6386]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6387]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[LEU-DEG2-PWY]]
 
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** '''4''' reactions found over '''6''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=96011}}
 
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{{#set: left-end-position=55580}}
 
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{{#set: centisome-position=39.7017    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=4}}
 
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{{#set: nb pathway associated=10}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite PROTOHEME

  • common-name:
    • ferroheme b
  • smiles:
    • c=cc1(c(c)=c7(c=c8(c(c)=c(ccc(=o)[o-])c6(=[n+]([fe--]24(n(c=1c=c3(c(c)=c(c=c)c(=[n+]23)c=c5(c(c)=c(ccc(=o)[o-])c(n45)=c6)))7))8))))
  • inchi-key:
    • kabfmibpwcxcrk-rggahwmasa-j
  • molecular-weight:
    • 614.482

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=PROTOHEME&oldid=136848"