Difference between revisions of "PROTOPORPHYRINOGEN"
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(Created page with "Category:gene == Gene SJ17018 == * transcription-direction: ** positive * right-end-position: ** 191301 * left-end-position: ** 170895 * centisome-position: ** 62.52538...") |
(Created page with "Category:gene == Gene SJ05217 == * transcription-direction: ** positive * right-end-position: ** 60175 * left-end-position: ** 57941 * centisome-position: ** 60.82151...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ05217 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 60175 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 57941 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 60.82151 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
| − | * [[ | + | * [[3.1.3.16-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] |
| − | ** | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | * [[ | + | * [[MRNA-GUANYLYLTRANSFERASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[POLYNUCLEOTIDE-5-PHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | * [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]] | |
| − | |||
| − | * [[RXN | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[TRIPHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
| − | |||
</div> | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7375]] |
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| − | |||
| − | |||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=60175}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=57941}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=60.82151 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
Revision as of 14:24, 26 August 2019
Contents
Gene SJ05217
- transcription-direction:
- positive
- right-end-position:
- 60175
- left-end-position:
- 57941
- centisome-position:
- 60.82151
Organism(s) associated with this gene
Reaction(s) associated
- 3.1.3.16-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- MRNA-GUANYLYLTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- POLYNUCLEOTIDE-5-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PROTEIN-TYROSINE-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7375
- 3 reactions found over 3 reactions in the full pathway
