Difference between revisions of "PSERPHOSPHA-RXN"

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(Created page with "Category:reaction == Reaction RXN-9549 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.14 ec-3.1.2.14] == Reaction formula == * 1 Pal...")
(Created page with "Category:reaction == Reaction PSERPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** l-3-phosphoserine phosphatase * ec-number: ** [http://enzyme.expasy.org/EC...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9549 ==
+
== Reaction PSERPHOSPHA-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** l-3-phosphoserine phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.2.14 ec-3.1.2.14]
+
** [http://enzyme.expasy.org/EC/3.1.3.3 ec-3.1.3.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Palmitoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[Phosphoserines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Serines]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ09777]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5994]], palmitate biosynthesis (animals and fungi, cytoplasm):
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-7746]], mycobacterial sulfolipid biosynthesis:
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plant cytoplasm):
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* METANETX-RXN : MNXR116163
−
** [http://www.genome.jp/dbget-bin/www_bget?R01706 R01706]
+
* UNIPROT:
−
* RHEA:
+
** [http://www.uniprot.org/uniprot/Q58989 Q58989]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30130 30130]
+
** [http://www.uniprot.org/uniprot/O25367 O25367]
 +
** [http://www.uniprot.org/uniprot/Q9JUR1 Q9JUR1]
 +
** [http://www.uniprot.org/uniprot/Q9CHW3 Q9CHW3]
 +
** [http://www.uniprot.org/uniprot/Q9PIL4 Q9PIL4]
 +
** [http://www.uniprot.org/uniprot/P44997 P44997]
 +
** [http://www.uniprot.org/uniprot/P0AGB0 P0AGB0]
 +
** [http://www.uniprot.org/uniprot/P42941 P42941]
 +
** [http://www.uniprot.org/uniprot/Q49823 Q49823]
 +
** [http://www.uniprot.org/uniprot/O82796 O82796]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-3.1.2.14}}
+
{{#set: common-name=l-3-phosphoserine phosphatase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-3.1.3.3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction PSERPHOSPHA-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-3-phosphoserine phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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