Difference between revisions of "PSII-RXN"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1581 PWY-1581] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2870 tax-28...") |
(Created page with "Category:reaction == Reaction 2-KETO-ADIPATE-DEHYDROG-RXN == * direction: ** left-to-right == Reaction formula == * 1 2K-ADIPATE[c] '''+''' 1 CO-A[c] '''+''' 1 N...") |
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| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction 2-KETO-ADIPATE-DEHYDROG-RXN == |
| − | * | + | * direction: |
| − | ** [ | + | ** left-to-right |
| − | ** [ | + | == Reaction formula == |
| − | ** [ | + | * 1 [[2K-ADIPATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[GLUTARYL-COA]][c] '''+''' 1 [[NADH]][c] |
| − | * | + | == Gene(s) associated with this reaction == |
| − | ** | + | * Gene: [[SJ19201]] |
| − | == | + | ** Category: [[orthology]] |
| − | * [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * [[ | + | * Gene: [[SJ13629]] |
| − | * [[ | + | ** Category: [[orthology]] |
| − | == | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
| − | {{#set: | + | * Gene: [[SJ06474]] |
| − | {{#set: | + | ** Category: [[orthology]] |
| − | {{#set: nb | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | {{#set: | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | {{#set: | + | == Pathway(s) == |
| + | * [[PWY-5652]], 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA: | ||
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY66-425]], L-lysine degradation II (L-pipecolate pathway): | ||
| + | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): | ||
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30796 30796] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01933 R01933] | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: nb gene associated=3}} | ||
| + | {{#set: nb pathway associated=3}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} | ||
Revision as of 20:44, 18 December 2020
Contents
Reaction 2-KETO-ADIPATE-DEHYDROG-RXN
- direction:
- left-to-right
Reaction formula
- 1 2K-ADIPATE[c] + 1 CO-A[c] + 1 NAD[c] => 1 CARBON-DIOXIDE[c] + 1 GLUTARYL-COA[c] + 1 NADH[c]
Gene(s) associated with this reaction
- Gene: SJ19201
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ13629
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ06474
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-5652, 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA:
- 2 reactions found over 5 reactions in the full pathway
- PWY66-425, L-lysine degradation II (L-pipecolate pathway):
- 1 reactions found over 9 reactions in the full pathway
- LYSINE-DEG1-PWY, L-lysine degradation XI (mammalian):
- 2 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
