Difference between revisions of "PURINE-NUCLEOSIDASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-9235 == * direction: ** left-to-right * common-name: ** ubiquinone biosynthesis methyltransferase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction METHYLMALONYL-COA-DECARBOXYLASE-RXN == * direction: ** reversible * common-name: ** (s)-methylmalonyl-coa decarboxylase * ec-number: ** [http...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9235 ==
+
== Reaction METHYLMALONYL-COA-DECARBOXYLASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** ubiquinone biosynthesis methyltransferase
+
** (s)-methylmalonyl-coa decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
+
** [http://enzyme.expasy.org/EC/4.1.1.41 ec-4.1.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-9869]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9871]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROPIONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ14591]]
−
* Gene: [[SJ02693]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ07072]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00609]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ11757]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20751]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ11297]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02842]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5857]], ubiquinol-10 biosynthesis (prokaryotic):
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5872]], ubiquinol-10 biosynthesis (eukaryotic):
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44765 44765]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21396 21396]
−
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
−
{{#set: common-name=ubiquinone biosynthesis methyltransferase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00923 R00923]
−
{{#set: ec-number=ec-2.1.1.201}}
+
* UNIPROT:
−
{{#set: nb gene associated=7}}
+
** [http://www.uniprot.org/uniprot/Q57079 Q57079]
−
{{#set: nb pathway associated=2}}
+
** [http://www.uniprot.org/uniprot/Q56724 Q56724]
 +
** [http://www.uniprot.org/uniprot/Q57490 Q57490]
 +
** [http://www.uniprot.org/uniprot/Q57111 Q57111]
 +
** [http://www.uniprot.org/uniprot/Q57286 Q57286]
 +
** [http://www.uniprot.org/uniprot/O86517 O86517]
 +
** [http://www.uniprot.org/uniprot/O52601 O52601]
 +
** [http://www.uniprot.org/uniprot/O54028 O54028]
 +
** [http://www.uniprot.org/uniprot/O54029 O54029]
 +
** [http://www.uniprot.org/uniprot/O54030 O54030]
 +
** [http://www.uniprot.org/uniprot/O54031 O54031]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=(s)-methylmalonyl-coa decarboxylase}}
 +
{{#set: ec-number=ec-4.1.1.41}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:21, 15 January 2021

Reaction METHYLMALONYL-COA-DECARBOXYLASE-RXN

  • direction:
    • reversible
  • common-name:
    • (s)-methylmalonyl-coa decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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